prot_L-elsbetiae_contig8755.17791.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8755.17791.1
Unique Nameprot_L-elsbetiae_contig8755.17791.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length141
Homology
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A6H5JVE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE7_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 8.760e-69
Identity = 115/139 (82.73%), Postives = 125/139 (89.93%), Query Frame = 0
Query:    1 MARRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWDVLGIWGGITAMFVGRFLAAAWRVMDRKRGPYWVLPPTKT 139
            MARRV TLTL CSG LAT LL L+GVIPRGFTSDPEVL+RLH+LLPLLAFQQPL+A+TLVAEGLLVGA QFRWL  TTV SSAVAA FIL+VG+RAP WDVLGIWGGITAMFVGRFL AAWRVMDRKRGP+WV+P + T
Sbjct:  468 MARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQFRWLATTTVGSSAVAAWFILMVGRRAPGWDVLGIWGGITAMFVGRFLGAAWRVMDRKRGPFWVVPASPT 606          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A835YXE7_9STRA (Mate-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.750e-40
Identity = 75/133 (56.39%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    1 MARRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWDVLGIWGGITAMFVGRFLAAAWRVMDRKRGPYWV 133
            MA RV  LT+    +L   L A  G +P  FT DP +  R+  L+PLLA QQPL+A TL+ EGLLVGA+QFRWLGATT+ +++V    +L VG+  P   V+G+W GIT MFVGRFL AAWR++DRKRGPYWV
Sbjct:  302 MAARVVALTVASGALLGAALAAARGALPAAFTRDPALAARIGALVPLLALQQPLVAATLLMEGLLVGAQQFRWLGATTLVTTSVGTAAVLAVGRLRPEAGVVGVWWGITGMFVGRFLGAAWRLLDRKRGPYWV 434          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: D7FUX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX8_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.760e-32
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 0
Query:    1 MARRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVA 85
            MARRV TLTL CSG LAT LL L+GVIPR FTSDPEVL+RLH+LLPLLA QQPL+A+TLVAEGLLVGA QFRWL  TTV SSAVA
Sbjct:  245 MARRVLTLTLACSGFLATSLLCLSGVIPRCFTSDPEVLKRLHQLLPLLAVQQPLVALTLVAEGLLVGAGQFRWLATTTVGSSAVA 329          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: UPI001E4E03A5 (MATE family efflux transporter n=1 Tax=Brevibacterium sp. CCUG 69071 TaxID=2052937 RepID=UPI001E4E03A5)

HSP 1 Score: 69.3 bits (168), Expect = 4.660e-11
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    3 RRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWD-VLGIWGGITAMFVG-RFLAAAWRVMDRKRGPYWVLPPTKTG 140
            RR+C   ++   ++   LLA +G+IPRGF+SDP+V+  L  LLP+LA   P+     V +G+L+GA   R+L    + +     G+ L++      W    G+W   +  FVG R +   WRV +R     W+    + G
Sbjct:  304 RRLCLWGIVFGVIVGVILLAGSGIIPRGFSSDPDVITVLAGLLPILALSMPIAGYVFVLDGVLMGAEDARYLALAQLIA---VGGYALLLIPTVDIWPGAAGLWAAFSIGFVGLRAVTLGWRVRNRD----WITRAVEKG 436          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A7Y3EE14_9BACT (MATE family efflux transporter n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3EE14_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 8.840e-11
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   15 VLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWDVLGIWGGITAMFVGRFLAAA 120
            VLA    A    +PR FTSDP+ + R+ RLLP + + QPL A+  V +G+L+GA++FR L    + S+AVAA  +L V      W + G+W  I A+   R +  A
Sbjct:  340 VLAATFAAARPWLPRLFTSDPDAVSRVDRLLPFIIWMQPLNAVVFVWDGILMGAQRFRILAVQMLLSAAVAAALLLRVVPSG--WGLDGVWWAIVALMAVRAITLA 443          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A4Z0IX75_9MICO (MATE family efflux transporter n=4 Tax=Brevibacterium TaxID=1696 RepID=A0A4Z0IX75_9MICO)

HSP 1 Score: 60.5 bits (145), Expect = 5.790e-8
Identity = 41/126 (32.54%), Postives = 63/126 (50.00%), Query Frame = 0
Query:    3 RRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWD-VLGIWGGITAMFVG-RFLAAAWRVMDR 126
            RR+C   ++   V+   L A +G+IPR F SD EV+  L  LLP+LA   P+     V +G+L+GA   R+L    + +     G+ +++      W    G+W      FVG R +   WRV +R
Sbjct:  304 RRLCLWGIVFGLVVGVILFAGSGIIPRAFASDAEVVTELTALLPVLAVSMPIAGYVFVLDGVLMGAEDARYLALAQLVA---VVGYAILLVPIVALWPGAPGLWAAFCIGFVGLRAVTLGWRVRNR 426          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A5C5RRC8_9ACTN (MATE family efflux transporter n=1 Tax=Tsukamurella sputi TaxID=2591848 RepID=A0A5C5RRC8_9ACTN)

HSP 1 Score: 60.1 bits (144), Expect = 7.940e-8
Identity = 48/131 (36.64%), Postives = 67/131 (51.15%), Query Frame = 0
Query:    3 RRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFI-LVVGKRAPAWDVLGIWGGITAMFVGRFLAAAWRVMDRKRGPYW 132
            RRV   + L + V+ATGL AL G +PR FTSDP VL  L      L    P+  +    +G+L+GA    +L   T+ ++ V  GF+ L+    A  W + GIW G+ A  V R  A    V+ R +G  W
Sbjct:  319 RRVTAWSTLFAVVIATGLAALHGTLPRVFTSDPAVLDALAVPWWFLVGMIPIAGVVFALDGVLLGASDAAYLRTATMAAALV--GFLPLIWLSYALGWGLAGIWSGLAAFMVLRCAA----VVLRFQGDRW 443          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: UPI001ADCAF65 (MATE family efflux transporter n=1 Tax=Brevibacterium marinum TaxID=418643 RepID=UPI001ADCAF65)

HSP 1 Score: 59.7 bits (143), Expect = 1.070e-7
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0
Query:    3 RRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWDVLGIWGGITAMFVG-RFLAAAWRVMD 125
            RR+C   ++    +   L A  G+IPRGF+S P+V+ +L  LLP+LA   P+     V +G+L+GA   R+L    + +    A  ++ V    P    L +W      FVG R L   WRV +
Sbjct:  294 RRLCLWGIVFGVAIGIILFAGAGIIPRGFSSAPDVVAQLTSLLPVLALSMPIAGYVFVLDGVLMGAEDARYLALAQLAAVGGYAVLLIPVVVYLP--GALWLWAAFCIGFVGLRALTLGWRVRN 415          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A1V5JIV7_9BACT (DNA-damage-inducible protein F n=1 Tax=bacterium ADurb.BinA028 TaxID=1866933 RepID=A0A1V5JIV7_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 1.470e-7
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 0
Query:   16 LATGLL--ALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWDVLG-----IWGGITAMFVGRFLAAAWRVMDRKRGPYWVLP 135
            LA G L  A  G++PR F+SDP V+      L ++A  Q +     VA+G+L+GA  FR+L    V + A  A  +L V +    W   G     +WGG TA  + R ++  WR+    RG  W++P
Sbjct:  326 LAVGALTAAAAGLVPRLFSSDPAVIGYAVPALLVVAAGQVVAGYVFVADGVLMGAGDFRYLAWAMVVALAAYAPVVLFV-RALGVWGEPGRVLVWLWGGYTAFMLARAVSLGWRL----RGDRWLIP 447          
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Match: A0A6G8Q8A3_9ACTN (MATE family efflux transporter n=1 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8Q8A3_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 2.320e-6
Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    2 ARRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAFQQPLIAMTLVAEGLLVGARQFRWL 74
            ARR+   ++   G+    LLA TG+IPR FT D EV+ R   L PL A  QP+ A     +G+L+GA   R+L
Sbjct:  310 ARRMIFWSVAVGGIFCLALLAGTGIIPRAFTGDAEVIERARELWPLFALMQPVGAAVFALDGILIGASDTRFL 382          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8755.17791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JVE7_9PHAE8.760e-6982.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXE7_9STRA1.750e-4056.39Mate-domain-containing protein n=1 Tax=Tribonema m... [more]
D7FUX8_ECTSI4.760e-3281.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001E4E03A54.660e-1132.14MATE family efflux transporter n=1 Tax=Brevibacter... [more]
A0A7Y3EE14_9BACT8.840e-1139.62MATE family efflux transporter n=2 Tax=Gemmatimona... [more]
A0A4Z0IX75_9MICO5.790e-832.54MATE family efflux transporter n=4 Tax=Brevibacter... [more]
A0A5C5RRC8_9ACTN7.940e-836.64MATE family efflux transporter n=1 Tax=Tsukamurell... [more]
UPI001ADCAF651.070e-733.06MATE family efflux transporter n=1 Tax=Brevibacter... [more]
A0A1V5JIV7_9BACT1.470e-734.65DNA-damage-inducible protein F n=1 Tax=bacterium A... [more]
A0A6G8Q8A3_9ACTN2.320e-642.47MATE family efflux transporter n=1 Tax=Rubrobacter... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002528Multi antimicrobial extrusion proteinPFAMPF01554MatEcoord: 3..84
e-value: 1.4E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR42893FAMILY NOT NAMEDcoord: 2..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..43
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..17
score: 0.52
NoneNo IPR availableTMHMMTMhelixcoord: 73..92
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8755contigL-elsbetiae_contig8755:6934..8139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8755.17791.1mRNA_L-elsbetiae_contig8755.17791.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8755 5845..8178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8755.17791.1 ID=prot_L-elsbetiae_contig8755.17791.1|Name=mRNA_L-elsbetiae_contig8755.17791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
MARRVCTLTLLCSGVLATGLLALTGVIPRGFTSDPEVLRRLHRLLPLLAF
QQPLIAMTLVAEGLLVGARQFRWLGATTVCSSAVAAGFILVVGKRAPAWD
VLGIWGGITAMFVGRFLAAAWRVMDRKRGPYWVLPPTKTG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE_fam