prot_L-elsbetiae_contig8746.17779.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8746.17779.1
Unique Name	prot_L-elsbetiae_contig8746.17779.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	226

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig8746.17779.1 vs. uniprot
Match: D8LM76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM76_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 3.050e-75
Identity = 132/188 (70.21%), Postives = 141/188 (75.00%), Query Frame = 0

Query:   41 QARVQAAEDSDAPIFYIKGLKEGGGVGVWGDDGGXXXXXXXXXXXXXXXXKDDNGXGNAGGDVSRARGGGNAAMMARALRNAEREIEGGGDYEEGVEQDE---GGAEEPVDETLVWEKVQAALGLGVWSYVGLGLAVFIIALNNVLGVGWAAKLIDPAYEPDSVLDVQQQGRQIQYMPLDDTSNLLSD 225
            Q RVQAAEDSDAPI YIKGLKEGGGVG+WG +                   DD  X         ARGGGNAAMMARALRNAEREIEGGGDYEEGVE++    G  E  V++  VWEKVQAALGLGVWSYVGLGLAVFII LNNVLGVGWA K+I+P YEPDSVL+VQQQGRQIQYMPLDD SNLLSD
Sbjct:   49 QQRVQAAEDSDAPILYIKGLKEGGGVGLWGSE-------------------DDXXXXXXXXXXXPARGGGNAAMMARALRNAEREIEGGGDYEEGVEEEGEGVGNQEAVVNQMPVWEKVQAALGLGVWSYVGLGLAVFIIVLNNVLGVGWATKIINPEYEPDSVLEVQQQGRQIQYMPLDDASNLLSD 217

[Close]

BLAST of mRNA_L-elsbetiae_contig8746.17779.1 vs. uniprot
Match: A0A6H5KPT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT2_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 5.510e-72
Identity = 128/186 (68.82%), Postives = 138/186 (74.19%), Query Frame = 0

Query:   43 RVQAAEDSDAPIFYIKGLKEGGGVGVWGDDGGXXXXXXXXXXXXXXXXKDDNGXGNAGGDVSRARGGGNAAMMARALRNAEREIEGGGDYEEGVEQDE---GGAEEPVDETLVWEKVQAALGLGVWSYVGLGLAVFIIALNNVLGVGWAAKLIDPAYEPDSVLDVQQQGRQIQYMPLDDTSNLLSD 225
            RV+AAEDSD PI YIKGLKEGGGVG+WG +                   DD  X          RGGGNAAMMARALRNAEREIEGGGDYEEGVE++    G  E  V++  VWEKVQAALGLGVWSYVGLGLAVFII LNNVLGVGWA K+I+P YEPDSVL+VQQQGRQIQYMPLDD SNLLSD
Sbjct:  122 RVKAAEDSDVPILYIKGLKEGGGVGLWGSE-------------------DDXXXXXXXXXXXXXRGGGNAAMMARALRNAEREIEGGGDYEEGVEEEGEVGGNQEAAVNQMPVWEKVQAALGLGVWSYVGLGLAVFIIVLNNVLGVGWATKIINPEYEPDSVLEVQQQGRQIQYMPLDDASNLLSD 288

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8746.17779.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8746.17779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LM76_ECTSI	3.050e-75	70.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPT2_9PHAE	5.510e-72	68.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 164..183
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..163
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 184..225
None	No IPR available	TMHMM	TMhelix		coord: 161..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8746	contig	L-elsbetiae_contig8746:7477..8154 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8746.17779.1	mRNA_L-elsbetiae_contig8746.17779.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8746 7477..8154 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8746.17779.1 ID=prot_L-elsbetiae_contig8746.17779.1|Name=mRNA_L-elsbetiae_contig8746.17779.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
DSEAGGATGGGGVSKAGGAAASAAASAAASAPQHRANKGKQARVQAAEDS
DAPIFYIKGLKEGGGVGVWGDDGGGGGGGGGSGGSGNSNSKDDNGDGNAG
GDVSRARGGGNAAMMARALRNAEREIEGGGDYEEGVEQDEGGAEEPVDET
LVWEKVQAALGLGVWSYVGLGLAVFIIALNNVLGVGWAAKLIDPAYEPDS
VLDVQQQGRQIQYMPLDDTSNLLSD*