prot_L-elsbetiae_contig8746.17778.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8746.17778.1
Unique Nameprot_L-elsbetiae_contig8746.17778.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length203
Homology
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BLAST of mRNA_L-elsbetiae_contig8746.17778.1 vs. uniprot
Match: A0A6H5KQH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.990e-23
Identity = 127/203 (62.56%), Postives = 139/203 (68.47%), Query Frame = 0 
Query:    1 AAQLARELARVVEGRHRRTLRRSLHLLHRHAEEGLARAVAVGREASCREAGARQLSAVLERNLLRRQARVWGRLLGATVAASGRLQRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAERRHQGEVGRIRAASGXXXXXXXXXXXXXXXXXXXXXXXXXQSRQARQRERALSRAVSCLLRSEARGRRGRMVHYLGQWR 203
            AAQL RELAR VEGR RR LRRSLH  +RHAE  LA AV V REA+ REAGAR+L A LE                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LSAE+RH+GEV  +RAA G XXXXXXXXXXXXXXXXX       +S + RQRE ALSRAVSC+LR+EAR  R R+V YL +WR
Sbjct:   59 AAQLGRELARAVEGRRRRLLRRSLHAWYRHAERRLAHAVTVDREATAREAGARRLFAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLSAEQRHRGEVATVRAACGAXXXXXXXXXXXXXXXXXALSLWRGKSHRGRQREGALSRAVSCVLRAEARVHRDRLVRYLARWR 261
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BLAST of mRNA_L-elsbetiae_contig8746.17778.1 vs. uniprot
Match: D8LM75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM75_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.170e-11
Identity = 45/61 (73.77%), Postives = 46/61 (75.41%), Query Frame = 0 
Query:    1 AAQLARELARVVEGRHRRTLRRSLHLLHRHAEEGLARAVAVGREASCREAGARQLSAVLER 61
            AAQL RELAR VEG  RR LRRSLH  HRHAE  LA AV V REAS REAGAR+L A LER
Sbjct:  852 AAQLGRELARAVEGGRRRLLRRSLHAWHRHAEGRLAHAVMVDREASAREAGARRLFAALER 912
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8746.17778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQH8_9PHAE2.990e-2362.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM75_ECTSI1.170e-1173.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8746contigL-elsbetiae_contig8746:581..1189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8746.17778.1mRNA_L-elsbetiae_contig8746.17778.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8746 581..1190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8746.17778.1 ID=prot_L-elsbetiae_contig8746.17778.1|Name=mRNA_L-elsbetiae_contig8746.17778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp
AAQLARELARVVEGRHRRTLRRSLHLLHRHAEEGLARAVAVGREASCREA
GARQLSAVLERNLLRRQARVWGRLLGATVAASGRLQRERDALERRDRLLA
AAESRSSRRLLSRAWLAWKGLSAERRHQGEVGRIRAASGAVVLAAVARRK
EDEALRQALSLWRGQSRQARQRERALSRAVSCLLRSEARGRRGRMVHYLG
QWR
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