prot_L-elsbetiae_contig8743.17774.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8743.17774.1
Unique Nameprot_L-elsbetiae_contig8743.17774.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length263
Homology
BLAST of mRNA_L-elsbetiae_contig8743.17774.1 vs. uniprot
Match: D7G0C5_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.820e-45
Identity = 155/285 (54.39%), Postives = 178/285 (62.46%), Query Frame = 0
Query:    1 VSLPWTDKRGVQRAALLTRTKAKPVVSNPLLMLATLLAWMGELPSDSLPEKRRFLLPECLLSPQSPP--------TLGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGSVP------------LSLGAAWLLAHLLFGRNAGGKVLRSFTARTRPDGKVCVYVGLSGGEVAALAMVSCPLIGWSPRPEEVMQARALSEGGGSLCGYSVSPSEFVTDTAAGGAAAAAELIRVGLAKAVE--GRLALALQMEAACELVLGVFVTKSWSPDREVMARVALGLRK 263
            V + WTD  G  R A+LTRTKAKP   NPL MLA LLAWM ELP  +LPE R  +  E LL+ QSP         T+G+  XXXXXXXXXXXXXXXXXXXXXXXXXXXX                  LSLGAAWLLAHL+FG + GGK    F  R   +GKV     LSG E  A+ ++ CPLIGWSPRP EV+QA  +SEG G LC YSV  + F T T   G AA  EL+  G A+ VE    LAL  +ME ACELVL +F+  +W  DREV A+VALGL K
Sbjct:  160 VPVTWTDSTGQSRTAILTRTKAKPKPCNPLPMLANLLAWMRELPPGALPENRLRIRLETLLALQSPSKSVSRQSSTIGKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLGAAWLLAHLMFGMDGGGKATGPFE-REILNGKV----SLSGAEANAMPLLLCPLIGWSPRPREVIQA--MSEGAGILCAYSVELAAFETQTGICGKAAD-ELVHAGFARKVEFGEMLALDQKMEDACELVLKIFLC-NWDVDREVRAQVALGLTK 435          
BLAST of mRNA_L-elsbetiae_contig8743.17774.1 vs. uniprot
Match: A0A6H5KLH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.390e-35
Identity = 120/226 (53.10%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    1 VSLPWTDKRGVQRAALLTRTKAKPVVSNPLLMLATLLAWMGELPSDSLPEKRRFLLPECLLSPQSPPTL----------------------GRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPG------SVPLSLGAAWLLAHLLFGRNAGGKVLR-SFTARTRPDGKVCVYVGLSGGEVAALAMVSCPLIGWSPRPEEVMQARALSEGGGSLCGYSVSPSEF 197
            V L WTD +G +R   L +TKAKP V NPLLMLATLLAWM E     LPE  R +LP+ LL+P    +                       G      XXXXXXXXXXXXXXXXXXXXXXXXX  G         LS GAAWLLAH++FGR +GG+  R S  A+    G++    GL+GGE AAL+++SCPLIGW PRPE+VM+A  LSEGGGSL  YS+SPSEF
Sbjct:  180 VPLTWTDSKGFKRTTSLIQTKAKPKVCNPLLMLATLLAWMREFSPGVLPESNRPVLPKALLAPDQASSSAATSALQSNNNGSKSNIRSNSSGNNSGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKEKFETELSPGAAWLLAHMMFGRGSGGQQQRVSSYAQVPHKGEI----GLNGGEAAALSLLSCPLIGWCPRPEDVMEA--LSEGGGSLRAYSISPSEF 399          
BLAST of mRNA_L-elsbetiae_contig8743.17774.1 vs. uniprot
Match: D7G0C7_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C7_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 7.220e-24
Identity = 71/149 (47.65%), Postives = 88/149 (59.06%), Query Frame = 0
Query:  147 VGLSGGEVAALAMVSCPLIGWSPRPEEVMQARALSEGGGSLCGYSVSPSEFVTDTA----------------------------AGGAAAAA--ELIRVGLAK--AVEGRLALALQMEAACELVLGVFVTKSWSPDREVMARVALGLRK 263
            +GL GGE AAL+++ CPLIGWSPRPE+VM+A  LSEGGGSL  YS+SPSEF T  A                             GG A AA  EL+RVG A+  A+ G L L  +ME  C+ VL +F+ + W P R+VMAR+ LGL K
Sbjct:  185 IGLYGGEAAALSLLPCPLIGWSPRPEDVMEA--LSEGGGSLRAYSISPSEFDTGVADNVRGQEVTPDIPKVKDLGVEQKREAAGGGGRAQAAVDELVRVGYARKRAILGLLTLTPKMEDTCKAVLKIFLGQDWDPQRDVMARITLGLIK 331          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8743.17774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0C5_ECTSI1.820e-4554.39Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
A0A6H5KLH2_9PHAE3.390e-3553.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0C7_ECTSI7.220e-2447.65Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8743contigL-elsbetiae_contig8743:67..3758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8743.17774.1mRNA_L-elsbetiae_contig8743.17774.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8743 67..3758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8743.17774.1 ID=prot_L-elsbetiae_contig8743.17774.1|Name=mRNA_L-elsbetiae_contig8743.17774.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp
VSLPWTDKRGVQRAALLTRTKAKPVVSNPLLMLATLLAWMGELPSDSLPE
KRRFLLPECLLSPQSPPTLGRRRRSSSSSSYNSNNNAAHDGGRSGGGGGG
GNPGSVPLSLGAAWLLAHLLFGRNAGGKVLRSFTARTRPDGKVCVYVGLS
GGEVAALAMVSCPLIGWSPRPEEVMQARALSEGGGSLCGYSVSPSEFVTD
TAAGGAAAAAELIRVGLAKAVEGRLALALQMEAACELVLGVFVTKSWSPD
REVMARVALGLRK
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