prot_L-elsbetiae_contig8740.17771.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8740.17771.1
Unique Nameprot_L-elsbetiae_contig8740.17771.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length293
Homology
BLAST of mRNA_L-elsbetiae_contig8740.17771.1 vs. uniprot
Match: D8LJ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ91_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.490e-187
Identity = 259/292 (88.70%), Postives = 277/292 (94.86%), Query Frame = 0
Query:    1 MKSFAFFVALFASANAWKKAELPEPSFGSRFTSIKEEADRFTTACRDVLNGEGPTFTIDVSDHTLGDGVGSLNLEGRFQREVVDNVDVGVIYKFNECRGLPTSVWVSTTQDVGDGMTANVRADMDVESKNAVIDCRVNNGRDSVAVDFDTEDSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDTTSAELTVNHAEESAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGGDRAVKVTAQRENVDWEYLEGAWVVKGNLPLTSSGANGAISFKRSVTL 292
            MKS AFFVALFA+ +AW+  E+PEPSFGSRFTSIKEEADRF+ ACRD LNGEGPTFTIDVSDH+L DGVGSLNLEGRFQREVVDNVD GV+YKFNECRG+PTS+WVSTTQD+GD MTAN+RADMD++SKNAVIDCRVN+GRDSVAVDFDT DSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGD TSAELTVNHAE+SAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLG  RAVK TAQRENVDWEYLEGAWVVKGN+PLTS+GA GAISFKRS+TL
Sbjct:    1 MKSVAFFVALFAATDAWRTVEVPEPSFGSRFTSIKEEADRFSAACRDALNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSNGATGAISFKRSITL 292          
BLAST of mRNA_L-elsbetiae_contig8740.17771.1 vs. uniprot
Match: A0A6H5K004_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K004_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 2.490e-182
Identity = 255/292 (87.33%), Postives = 274/292 (93.84%), Query Frame = 0
Query:    1 MKSFAFFVALFASANAWKKAELPEPSFGSRFTSIKEEADRFTTACRDVLNGEGPTFTIDVSDHTLGDGVGSLNLEGRFQREVVDNVDVGVIYKFNECRGLPTSVWVSTTQDVGDGMTANVRADMDVESKNAVIDCRVNNGRDSVAVDFDTEDSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDTTSAELTVNHAEESAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGGDRAVKVTAQRENVDWEYLEGAWVVKGNLPLTSSGANGAISFKRSVTL 292
            MKS AFFVALFA+ +AW+  E+ EPSFGSRFTSIKEEADRF+ ACRDVLNGEGPTFTIDVSDH+L DGVGSLNLEGRFQREVVDNVD GV+YKFNE RG+PTS+WVSTTQD+GD MTAN+RADMD++SKNAVIDCRVN+GRDSVAVDFDT DSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVV+AAELDGD TSAELTVNHAE+SAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLG  RAVK TAQRENVDWEYLEG WVVKGN+PLTS G+ GAISFKRS+TL
Sbjct:   81 MKSVAFFVALFAATDAWRTVEVAEPSFGSRFTSIKEEADRFSAACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNERRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVIAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGPWVVKGNVPLTSDGSTGAISFKRSITL 372          
BLAST of mRNA_L-elsbetiae_contig8740.17771.1 vs. uniprot
Match: A0A836CCC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC7_9STRA)

HSP 1 Score: 270 bits (690), Expect = 3.250e-87
Identity = 129/240 (53.75%), Postives = 182/240 (75.83%), Query Frame = 0
Query:   53 GPTFTIDVSDHTLGDGVGSLNLEGRFQREVVDNVDVGVIYKFNECRGLPTSVWVSTTQDVGDGMTANVRADMDVESKNAVIDCRVNNGRDSVAVDFDTEDSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDTTSAELTVNHAEESAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGGDRAVKVTAQRENVDWEYLEGAWVVKGNLPLTSSGANGAISFKRSVTL 292
            GP F ++++D +L DG GSLNLEG + RE+VDNV+ GV Y +N  RGLP+S+WVST+ D+ D      +A+ DV+SK  VI+ R+  G D +++DFDT  +  GPL++ K LD+NGR++ ++PT++V+ +TGE+V+  E+D D T+AELT+N A+ESA LEV HRLDD NV+SPKV+LK+GD++VRLNR+L     ++VTA R+NVDWE+ E AW VKGN+PL  +GA+  ISFKRS+ L
Sbjct:   21 GPVFHVNINDPSLKDGAGSLNLEGEYSRELVDNVNAGVKYDYNANRGLPSSLWVSTSADIDDDTKLCAKAEYDVKSKATVIEARLERGSDGISIDFDTGSNEAGPLKLRKVLDMNGRRLTLEPTINVRDRTGELVINTEVDEDKTTAELTLNQADESASLEVSHRLDDFNVVSPKVNLKSGDVSVRLNRALDNGGVIEVTADRKNVDWEFNENAWTVKGNIPLEDTGAS-TISFKRSINL 259          
BLAST of mRNA_L-elsbetiae_contig8740.17771.1 vs. uniprot
Match: A0A836CPR3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR3_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.140e-75
Identity = 117/240 (48.75%), Postives = 170/240 (70.83%), Query Frame = 0
Query:   53 GPTFTIDVSDHTLGDGVGSLNLEGRFQREVVDNVDVGVIYKFNECRGLPTSVWVSTTQDVGDGMTANVRADMDVESKNAVIDCRVNNGRDSVAVDFDTEDSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDTTSAELTVNHAEESAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGGDRAVKVTAQRENVDWEYLEGAWVVKGNLPLTSSGANGAISFKRSVTL 292
            GP   I+V D +L  GVGSLNL G   RE+V+NV+ G+ Y +N  RGLP+S+WVST+ +V D +  + +A+ D++SK+ +I+ R+  G D +A+DFDT  +  GPLRI K  D NGR+++V+P  +V+ +TGE+V+ +E+D D T+AELT++ A +SA LEV HRLD+ N++ PKVDLK GD++VRL R+L     + VTA + N+DWE  E +W VKGN+PL  +     ISFKRS++L
Sbjct:   22 GPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDT-QRSTISFKRSISL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8740.17771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ91_ECTSI1.490e-18788.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K004_9PHAE2.490e-18287.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCC7_9STRA3.250e-8753.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPR3_9STRA2.140e-7548.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8740contigL-elsbetiae_contig8740:3058..5568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8740.17771.1mRNA_L-elsbetiae_contig8740.17771.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8740 3001..6556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8740.17771.1 ID=prot_L-elsbetiae_contig8740.17771.1|Name=mRNA_L-elsbetiae_contig8740.17771.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp
MKSFAFFVALFASANAWKKAELPEPSFGSRFTSIKEEADRFTTACRDVLN
GEGPTFTIDVSDHTLGDGVGSLNLEGRFQREVVDNVDVGVIYKFNECRGL
PTSVWVSTTQDVGDGMTANVRADMDVESKNAVIDCRVNNGRDSVAVDFDT
EDSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDTTSAE
LTVNHAEESAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGGDRAVK
VTAQRENVDWEYLEGAWVVKGNLPLTSSGANGAISFKRSVTL*
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