prot_L-elsbetiae_contig874.17769.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig874.17769.1
Unique Nameprot_L-elsbetiae_contig874.17769.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length250
Homology
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BLAST of mRNA_L-elsbetiae_contig874.17769.1 vs. uniprot
Match: D8LGF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF3_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.160e-49
Identity = 84/97 (86.60%), Postives = 85/97 (87.63%), Query Frame = 0 
Query:    1 MALSTTEQFRPCRRVLTPGFSGANHPRAQGLLRIEPSPRETPRPTGLRTNAKASRRSGYDVPDPGLVLQSKHVVKDDTGRAAKERVSGELTLEKAFG 97
            MA S TEQFRPCRRVLTPGFSG    R QGL RIE SPR TPRPTGLRTNAKASRRSGYD+PDPGLVLQSKHVV DDTGR AKERVSGELTLEKAFG
Sbjct:    1 MAGSATEQFRPCRRVLTPGFSGTEEARPQGLARIESSPRVTPRPTGLRTNAKASRRSGYDIPDPGLVLQSKHVVMDDTGRPAKERVSGELTLEKAFG 97
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BLAST of mRNA_L-elsbetiae_contig874.17769.1 vs. uniprot
Match: A0A835YX95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX95_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.210e-25
Identity = 74/165 (44.85%), Postives = 92/165 (55.76%), Query Frame = 0 
Query:    3 LSTTEQFRPCRRVLTPGFSGANHPRAQGLLRIEPSPRE--TPRPTG----------LRTNAKASRRSGYDVPDPGLVLQSKHVVKDD--TGRAAKERVSGELTLEKAFGLKRKVNSQRERRGGVPAKGNPGDKLFHHVDYSPGFHEHGELAVGSSFYRTVPRRGG 153
            LS T  FRP  R+           +A+      P+ R+  +P PTG          LR   + SRRSG+D+PDP L LQ K VV  D  TG  AK+ VSGELTLE+ FG+K K+   R  R  + A+  PGDKL+HHVDYSPGF+  G   VGS+F R   R GG
Sbjct:   41 LSDTAAFRPHIRI-------DEQAKARRGREASPTGRKHFSPEPTGDGRAASARPGLRQIPELSRRSGFDMPDPDLSLQRKRVVVADAATGAFAKDHVSGELTLERTFGVKHKLAEMRGVRNAI-AQACPGDKLYHHVDYSPGFYREGGHVVGSTFVRDAARVGG 197
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig874.17769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF3_ECTSI1.160e-4986.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX95_9STRA1.210e-2544.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig874contigL-elsbetiae_contig874:15723..17860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig874.17769.1mRNA_L-elsbetiae_contig874.17769.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig874 15723..17860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig874.17769.1 ID=prot_L-elsbetiae_contig874.17769.1|Name=mRNA_L-elsbetiae_contig874.17769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MALSTTEQFRPCRRVLTPGFSGANHPRAQGLLRIEPSPRETPRPTGLRTN
AKASRRSGYDVPDPGLVLQSKHVVKDDTGRAAKERVSGELTLEKAFGLKR
KVNSQRERRGGVPAKGNPGDKLFHHVDYSPGFHEHGELAVGSSFYRTVPR
RGGERTAPGEVTPPAALPGDLGYNLHYRKPSRAFHETRQAMGYLEDLRAV
LELTEAAPAPPTAADQDEGVSWEDKTGMHTWPRKEKQSPPSATERSSDE*
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