prot_L-elsbetiae_contig8728.17759.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8728.17759.1
Unique Nameprot_L-elsbetiae_contig8728.17759.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length169
Homology
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: D8LLG5_ECTSI (DEAD/DEAH box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 1.370e-80
Identity = 138/164 (84.15%), Postives = 147/164 (89.63%), Query Frame = 0
Query:    4 PGAQGGAAESLRFDPHLAFDYLKSLPIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTPFGEVSA 167
            PGA+ GAAE LRFDP  A +YLKSLPIYE QAVYSETLPGR GE+ D LRPLHPE+ AAL  SKGVTRLFKHQ+LAIDAAAAG+HVALSTATSSGKSVVFNVSVI+A+VGPRPDAVALYLFPTKALAQDQLRSLK LVGAS YLS+RVRPMTLDGDTPF E  A
Sbjct:   85 PGAEEGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRSGEYEDTLRPLHPELKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIDAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSQRVRPMTLDGDTPFRERGA 248          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A6H5KP27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 4.120e-80
Identity = 140/164 (85.37%), Postives = 146/164 (89.02%), Query Frame = 0
Query:    4 PGAQGGAAESLRFDPHLAFDYLKSLPIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTPFGEVSA 167
            PGA+ GAAE LRFDP  A +YLKSLPIYE QAVYSETLPGR GE+ D  RPLHPEV AAL  SKGV RLFKHQ+LAIDAAAAG+HVALSTATSSGKSVVFNVSVIEA+VGPRPDAVALYLFPTKALAQDQLRSLKGLVGAS YLSERVRPMTLDGDTPF E  A
Sbjct:  269 PGAEDGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTKRPLHPEVKAALERSKGVARLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASPYLSERVRPMTLDGDTPFRERGA 432          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A7S2WFF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFF7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.250e-36
Identity = 79/136 (58.09%), Postives = 94/136 (69.12%), Query Frame = 0
Query:   26 KSLPIYEGQAVYSETLPGRDGEF---ADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAA-GQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLD 157
            K LP Y  Q ++ ETLP R GEF   +D    + P V  AL  SKG++RLF+HQ+ AIDAA   G HVALST TSSGKSV FNV V+  LV  +PDAVA+YLFPTKALAQDQL S +GL+G S  L   V P+T+D
Sbjct:    1 KGLPFYRDQVMHVETLPPRAGEFVELSDLAVEIAPCVLEALQKSKGISRLFRHQADAIDAAVGHGMHVALSTGTSSGKSVAFNVPVLHRLV-EQPDAVAIYLFPTKALAQDQLGSFQGLIGGSPALESSVLPLTVD 135          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: F2TYE6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 126 bits (317), Expect = 1.340e-30
Identity = 73/152 (48.03%), Postives = 98/152 (64.47%), Query Frame = 0
Query:   10 AAESLRFDPHLAFDYLKSLPIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTP 161
            A    +FDP    D+L  LP+ +G +++ ETLP R   F +  RPL   +   LA   G+ RLF HQ+  ++AA  G HV +STATSSGKS+V+++  +EAL+    + VALY+FPTKALAQDQLRSL+  VGA  +L + VR   LD DTP
Sbjct:  249 ATPPAQFDPKEILDHLLRLPLAKGHSLHVETLPARAPVFGELERPLPSPLQHTLA-DLGIQRLFSHQAEGVNAARDGAHVMISTATSSGKSLVYHLPTMEALLSDPHNTVALYIFPTKALAQDQLRSLREFVGAG-WLGDAVRADCLDADTP 398          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A7S3R7F2_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R7F2_DUNTE)

HSP 1 Score: 120 bits (302), Expect = 8.100e-29
Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 0
Query:    6 AQGGAAESLR----FDPHLAFDYLKSLPIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTPFGEVSA 167
            A GG  E  R      P    ++L+ L  Y GQ V++E +P     F  P  P      +ALA ++G++RLF HQ+ A+DA   G HVA+ST+T+SGKS+ +N+ ++EAL    PD+ ALY FPTKALAQDQL SL+ LV A A+          DGDTP G+  A
Sbjct:  201 AGGGGGELCRSCKEMGPEEVLEHLQQLAWYNGQVVHTERMPACPARFGSPTHPFSDTTISALA-TRGMSRLFSHQAAAVDAVLGGAHVAVSTSTASGKSLCYNLPILEALAMD-PDSCALYCFPTKALAQDQLMSLRALVRA-AFGQSAPAVEIYDGDTPQGDRPA 363          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A8J9S2L8_9CHLO (Probable ATP-dependent helicase hrq1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S2L8_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 1.050e-28
Identity = 70/144 (48.61%), Postives = 99/144 (68.75%), Query Frame = 0
Query:   18 PHLAFDYLKSLPIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTP 161
            P     +L+++  Y+ Q V++E +P R  ++++P  PL   V AAL+A +GVT LF HQ+ AIDAA AG+HV + T+T+SGKS+ +N+ ++EALV   P A ALY+FPTKALAQDQLR+LK L  A+A+  +       DGDTP
Sbjct:  605 PEAFLAHLRTVSWYKDQIVHTEQIPARAAQYSEPAAPLSSPVRAALSA-RGVTHLFTHQAQAIDAARAGKHVVVCTSTASGKSLCYNLPILEALVRD-PQATALYMFPTKALAQDQLRALKELC-AAAFGDKAPCIDIYDGDTP 745          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A7V2CKQ6_9BACT (DEAD/DEAH box helicase (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CKQ6_9BACT)

HSP 1 Score: 117 bits (294), Expect = 1.210e-28
Identity = 67/131 (51.15%), Postives = 87/131 (66.41%), Query Frame = 0
Query:   31 YEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTP 161
            Y GQ    E LP R   +A P  PLHP +   L A +G+  L+ HQ+ AIDA AAG++V + T T+SGK++ +N+ V+++L+   P+A ALYLFPTKALAQDQL +LK L  A   LS  VRP T DGDTP
Sbjct:   16 YRGQIAAVEELPARPARYAPPQTPLHPVLRQMLRA-EGIEELYLHQARAIDALAAGRNVVVVTGTASGKTMCYNLPVLQSLL-ESPEARALYLFPTKALAQDQLGTLKRLAAADLILSGTVRPATYDGDTP 144          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A5A8CYB9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYB9_CAFRO)

HSP 1 Score: 120 bits (300), Expect = 2.460e-28
Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 0
Query:   29 PIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTPFGEVSA 167
            P Y  Q  +  T+  R  +F D  RP+HP +  A+ A +G+T+ F+HQSLAIDAA AG+HV +ST+TSSGKS+VF+V V + L+  R  AVA+ +FPTKALAQDQLR+++     SA L+  VR  TLDGD+   E  A
Sbjct:  219 PWYVDQLRHVHTILPRPAKFRDVERPVHPAIRMAMHA-RGITKFFEHQSLAIDAALAGKHVVISTSTSSGKSLVFSVPVFDRLLRDRA-AVAILIFPTKALAQDQLRAVREFCRGSATLASAVRAATLDGDSSPAEREA 355          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A835ZL03_9STRA (DEAD/DEAH box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL03_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.980e-27
Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 0
Query:   71 RLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSERVRPMTLDGDTPFGE 164
            R +KHQ++ I+A  AGQH+A+STATSSGKSVVF V V++AL+   P+AVAL++FPTKALAQDQLRS++ L+ A  +L+  +    LDGDTPF E
Sbjct:    1 RFYKHQAVGINAVVAGQHLAISTATSSGKSVVFTVPVLQALLTGEPNAVALFVFPTKALAQDQLRSMRALLAADDHLNAAITCGCLDGDTPFAE 94          
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Match: A0A7V8CYU6_9CHLR (DEAD/DEAH box helicase n=1 Tax=Chloroflexia bacterium SDU3-3 TaxID=2651839 RepID=A0A7V8CYU6_9CHLR)

HSP 1 Score: 117 bits (293), Expect = 2.160e-27
Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0
Query:   25 LKSLPIYEGQAVYSETLPGRDGEFADPLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKSVVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASA-YLSERVRPMTLDGDTPFGE 164
            L+ +P Y+ Q  + E LP ++   ADP +PL P ++AALA  +GV RL+ HQ+ A+DAA AG H+ + TAT+SGK++ + +  +E+++   P + AL LFPTKALA DQ+RSL GL+ A A + +  +    LDGDTP+ E
Sbjct:    9 LRQIPGYQSQIAHVEPLPAKEARLADPAQPLAPALAAALA-ERGVARLYAHQAAALDAARAGGHIGVVTATASGKTLCYQLPSVESILAD-PQSRALLLFPTKALAHDQMRSLGGLLDALARHGAPPIHAAALDGDTPYRE 147          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8728.17759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG5_ECTSI1.370e-8084.15DEAD/DEAH box helicase domain-containing protein n... [more]
A0A6H5KP27_9PHAE4.120e-8085.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WFF7_9STRA1.250e-3658.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F2TYE6_SALR51.340e-3048.03Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7S3R7F2_DUNTE8.100e-2943.98Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
A0A8J9S2L8_9CHLO1.050e-2848.61Probable ATP-dependent helicase hrq1 n=1 Tax=Cocco... [more]
A0A7V2CKQ6_9BACT1.210e-2851.15DEAD/DEAH box helicase (Fragment) n=1 Tax=Phycisph... [more]
A0A5A8CYB9_CAFRO2.460e-2850.36Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A835ZL03_9STRA1.980e-2759.57DEAD/DEAH box helicase n=1 Tax=Tribonema minus Tax... [more]
A0A7V8CYU6_9CHLR2.160e-2745.39DEAD/DEAH box helicase n=1 Tax=Chloroflexia bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 31..167
e-value: 1.3E-17
score: 65.8
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 33..147
NoneNo IPR availablePANTHERPTHR24031:SF643coord: 33..147
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 74..142
e-value: 1.2E-9
score: 38.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 54..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8728contigL-elsbetiae_contig8728:4506..7208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8728.17759.1mRNA_L-elsbetiae_contig8728.17759.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8728 4506..7208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8728.17759.1 ID=prot_L-elsbetiae_contig8728.17759.1|Name=mRNA_L-elsbetiae_contig8728.17759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
KAAPGAQGGAAESLRFDPHLAFDYLKSLPIYEGQAVYSETLPGRDGEFAD
PLRPLHPEVSAALAASKGVTRLFKHQSLAIDAAAAGQHVALSTATSSGKS
VVFNVSVIEALVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASAYLSER
VRPMTLDGDTPFGEVSAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase