prot_L-elsbetiae_contig8721.17750.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8721.17750.1
Unique Nameprot_L-elsbetiae_contig8721.17750.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length104
Homology
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BLAST of mRNA_L-elsbetiae_contig8721.17750.1 vs. uniprot
Match: D7FZY4_ECTSI (DNA repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY4_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 9.840e-16
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:   39 RAVSTVSAQGATANVTNEEALQRSVDTASRMAGWAGRVVERVLKEHRQP 87
            RA S VSAQGATA+ TNE ALQRSVD ASRMAGWAGRVVERVLKEHR+P
Sbjct:  821 RASSQVSAQGATASYTNEAALQRSVDMASRMAGWAGRVVERVLKEHRKP 869
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BLAST of mRNA_L-elsbetiae_contig8721.17750.1 vs. uniprot
Match: A0A6H5KXJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ8_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.500e-15
Identity = 63/102 (61.76%), Postives = 69/102 (67.65%), Query Frame = 0 
Query:    1 GAVKEEGSDEDFDGFVDDDXXXXXXXXXXXXEDELARGRAVSTVSAQGATANVTNEEALQRSVDTASRMAGWAGRVVERVLKEHRQPAL-PSSSSSVAAAAG 101
            GAV+E+ SD  FDGFV         XXXXXX       RA S VSAQGAT + TNE ALQRSVD ASRMAGWAGRVVERVLKEHR+    PS S   A+A+G
Sbjct:  788 GAVEED-SDXXFDGFV---------XXXXXXXXXXXXXRASSQVSAQGATTSYTNEAALQRSVDMASRMAGWAGRVVERVLKEHRKARKRPSFSHRAASASG 879
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8721.17750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZY4_ECTSI9.840e-1685.71DNA repair enzyme n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KXJ8_9PHAE2.500e-1561.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8721contigL-elsbetiae_contig8721:2773..5634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8721.17750.1mRNA_L-elsbetiae_contig8721.17750.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8721 2773..5636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8721.17750.1 ID=prot_L-elsbetiae_contig8721.17750.1|Name=mRNA_L-elsbetiae_contig8721.17750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp
GAVKEEGSDEDFDGFVDDDDGGDGDEDEEDGEDELARGRAVSTVSAQGAT
ANVTNEEALQRSVDTASRMAGWAGRVVERVLKEHRQPALPSSSSSVAAAA
GSSS
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