prot_L-elsbetiae_contig872.17748.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig872.17748.1
Unique Nameprot_L-elsbetiae_contig872.17748.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length157
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig872.17748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.539
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 4..23
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig872contigL-elsbetiae_contig872:24246..24716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig872.17748.1mRNA_L-elsbetiae_contig872.17748.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig872 23994..24716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig872.17748.1 ID=prot_L-elsbetiae_contig872.17748.1|Name=mRNA_L-elsbetiae_contig872.17748.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp
MVLAVNAAARAAVVAVAVAVALVQERCRRCRHGGRRRGLLAKTLAGVRIR
KTHSQGVHALEPERGPAAAAGGGAIASCSAIDAAAASGVVVAASEVWPDS
SGLAAVAAPAVIQVVVATITGVSWSLRPGRVAIRCAILSSPVGIAHQPPP
LSVPLGV
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