prot_L-elsbetiae_contig867.17702.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig867.17702.1
Unique Nameprot_L-elsbetiae_contig867.17702.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length341
Homology
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BLAST of mRNA_L-elsbetiae_contig867.17702.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 7.580e-38
Identity = 108/188 (57.45%), Postives = 130/188 (69.15%), Query Frame = 0 
Query:   31 GYAM-HRRHTDTMSSQPSPGLVEGGQGGAATVTPATSLSRSLSWTLPLEPYYPYLSQ--PPEMSRSRSDQI---NYRAARRLQRQ--QQGSVGTRFSHHPRARSSSGYAYSTDEDSASMESKMILNYVESPLKKTPAFWDAPRPVLER---RRESGLLPAGYGTARWRGP---ATSLGPRLSRAVTTD 204
            GYA+ +RR TDT+ SQP+ G  +GG+G   +VTPATS   S+S TLPLE  +  ++   P  M RSRSDQ+   + R++RRLQ+   Q G VGTRF   PRA  S G+AYSTDEDSASMES+MILNYVESPLKKTP FW+APRPVL+R   RRE GLLPAGYGT    G    A  + P  +RA T D
Sbjct: 1607 GYAVVYRRLTDTLYSQPTTGN-DGGEG--TSVTPATSHCPSVSSTLPLELSFSAVAAQGPVAMGRSRSDQLPKCSSRSSRRLQQSPHQPGVVGTRF---PRA-PSGGFAYSTDEDSASMESRMILNYVESPLKKTPEFWEAPRPVLDRLNRRRERGLLPAGYGTGLLTGSSSGAMKVEPGRTRASTAD 1787
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17702.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.640e-32
Identity = 94/155 (60.65%), Postives = 111/155 (71.61%), Query Frame = 0 
Query:   31 GYA-MHRRHTDTMSSQPSPGLVEGGQGGAATVTPATSLSRSLSWTLPLEPYYPYLSQ--PPEMSRSRSDQINYRAA--RRLQRQ--QQGSVGTRFSHHPRARSSSGYAYSTDEDSASMESKMILNYVESPLKKTPAFWDAPRPVLER---RRESG 175
            GYA ++RR TD +SSQPS G    G G   +VTPATS   S+S TLPLE  +P ++   P  M RSRSDQ+  R++  RRLQ+   Q G+VGTRF   PRA  S G+AYSTDEDSASMES+MILNYVESPLKKTP FW+APRPVL+R   RRE G
Sbjct: 1599 GYAAVYRRLTDALSSQPSTG---NGGGEGTSVTPATSHCPSVSSTLPLELIFPAVAAQGPVAMGRSRSDQLPKRSSSSRRLQQSPHQSGAVGTRF---PRA-PSGGFAYSTDEDSASMESRMILNYVESPLKKTPEFWEAPRPVLDRLNRRRERG 1746
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig867.17702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPG5_9PHAE7.580e-3857.45P-type phospholipid transporter n=1 Tax=Ectocarpus... [more]
D7FU18_ECTSI2.640e-3260.65Phospholipid-transporting ATPase, putative n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 340..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig867contigL-elsbetiae_contig867:1367..3667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig867.17702.1mRNA_L-elsbetiae_contig867.17702.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig867 1367..3668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig867.17702.1 ID=prot_L-elsbetiae_contig867.17702.1|Name=mRNA_L-elsbetiae_contig867.17702.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=341bp
RAEAPYAGGRGGVGGSRRGLEGDDDEDDDDGYAMHRRHTDTMSSQPSPGL
VEGGQGGAATVTPATSLSRSLSWTLPLEPYYPYLSQPPEMSRSRSDQINY
RAARRLQRQQQGSVGTRFSHHPRARSSSGYAYSTDEDSASMESKMILNYV
ESPLKKTPAFWDAPRPVLERRRESGLLPAGYGTARWRGPATSLGPRLSRA
VTTDARYAGGGGGRVVNAGGGRIGEASDDYYHAGVRAPPPPPRVRFGSAD
GASGGGGSSGGHRGGGDGRIDRRLRSSASPAAGAAAAAAAASGRSRGDGP
AVQPRRTETSRHRWEGKPDLKRSGSAPHLRGRDARSAIGND
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