prot_L-elsbetiae_contig864.17675.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig864.17675.1
Unique Name	prot_L-elsbetiae_contig864.17675.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	476

Homology

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BLAST of mRNA_L-elsbetiae_contig864.17675.1 vs. uniprot
Match: D8LPR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR3_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 4.380e-206
Identity = 324/469 (69.08%), Postives = 363/469 (77.40%), Query Frame = 0

Query:    6 AEFRQVFEGVLANPTEHFSLFDTRGKGLVDVSEVFASAFLFAAGTPRGLDAKLDKLWQLFDFDHNGSLDDVEAEIMLECVVRGASRVAMMPQPEDVLDSIGKLTVSLFSHSKRQAVAGELILRDLQEWISEREDVATFLHNFTEARLIMSSLELVEESVALGMDMCKRAASQDDVSEEHKNGTVDALQAGEILRSLVTVGNMECVKAGMEAVIEADADAVVRMLTGSPGVSSGGREKRVDVQALEGLLRFWVAFSVVDEDGVGSVSVGDLKARGLPRYNIFLQTALLWLGGGTVGEEPSEATVQKTANDIDESQDGLIKRMEWIRYTAVLDEGKGIVGYDGELLKVFRRYDDDRSGSITAHEMITMVRDSVTDAIAEVPD-CCLRPGMQPVVDTLVKDIARDLVAVMDVTGSGMLGWTDFKKNQNLVTTRLATLREFVFSAALHRGG-AAATAAAAEASQGANTSRRPD 472
            AE  QVFEG+L NPTE FS+FD RGKGLVDVSEVFASAFLFAAGTP+GLDAKL+K++ LFDFD NG+L DVEAEIMLECVVRG                               A AGEL LRDL++WISEREDVA FL NF EAR+I+SS ELV+ SVALGM  CK  + QDD   EHK+GTVD  +AGEILRSL T+G  EC++AG+EAV+EADA AVVRML+G+ G ++GGR +RVDV+ALE LLRFWVAFSVVDEDGVGSVS+GDLKA             LLWLGGGT GEEP EATVQKTAN IDESQDG+I R+EW+R+TAVLDEG G VGYDG LLKVFRRYDDD SGSITA EM  MVRDSV++AIAE PD C LRP ++PVV+TLVKD+ARDLVAVMDVTGSGMLGWT+FKKNQ LVT RLATLREFVFS AL RGG AAATA A      +N S RPD
Sbjct:   29 AEDFQVFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEKIFALFDFDGNGALSDVEAEIMLECVVRGG------------------------------AAAGELTLRDLKDWISEREDVAVFLSNFIEARMIISSQELVDRSVALGMSTCKHPSPQDDSPGEHKDGTVDGARAGEILRSLTTLGKTECLRAGLEAVVEADAAAVVRMLSGNSG-ATGGRRERVDVEALEELLRFWVAFSVVDEDGVGSVSMGDLKA-------------LLWLGGGTGGEEPPEATVQKTANGIDESQDGVINRIEWMRFTAVLDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAIAEAPDNCSLRPDIEPVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALQRGGTAAATADAPPELASSNGSTRPD 453

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BLAST of mRNA_L-elsbetiae_contig864.17675.1 vs. uniprot
Match: A0A6H5KRT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.420e-25
Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0

Query:  392 MQPVVDTLVKDIARDLVAVMDVTGSGMLGWTDFKKNQNLVTTRLATLREFVFSAALHRGG-AAATAAAAEASQGANTSRRPD 472
            M+PVV+TLVKD+ RDLVAVMDVTGSGMLGWT+ KKNQ LVT RLATLREFVFS AL RGG AAATA A      +N S RPD
Sbjct:    1 MEPVVETLVKDVTRDLVAVMDVTGSGMLGWTELKKNQTLVTARLATLREFVFSVALQRGGTAAATADAPPELTRSNCSTRPD 82

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BLAST of mRNA_L-elsbetiae_contig864.17675.1 vs. uniprot
Match: A0A7S2Y3U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3U1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.010e-6
Identity = 27/93 (29.03%), Postives = 49/93 (52.69%), Query Frame = 0

Query:  290 ALLWLGGGTVGEEPSEATVQKTANDIDESQDGLIKRMEWIRYTAVLDEGKGIVGYDGELLKVFRRYDDDRSGSITAHEMITMVRDSVTDAIAE 382
            AL+W+  G    EP +  V+    ++D    G + R+EW+ +    D   G V    ++ + F   D D SG+ITA EM+ +++ S+ D +++
Sbjct:    6 ALIWISEGIDTPEPFDKVVRVAMEEMDVDNSGHVDRLEWLLFNVHFDPATGCVKPAKQIKESFLSLDTDGSGTITAAEMVEILKQSMEDILSK 98

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig864.17675.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig864.17675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LPR3_ECTSI	4.380e-206	69.08	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRT1_9PHAE	2.420e-25	74.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2Y3U1_9STRA	6.010e-6	29.03	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 57..85 e-value: 7.6 score: 10.6 coord: 347..375 e-value: 0.005 score: 26.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 399..434 score: 5.447
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 23..49 score: 5.587
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 343..378 score: 11.333
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 53..88 score: 8.879
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 250..285 score: 5.001
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 303..338 score: 6.452
None	No IPR available	GENE3D	1.10.238.10		coord: 1..152 e-value: 2.9E-8 score: 35.4
None	No IPR available	GENE3D	1.10.238.10		coord: 253..333 e-value: 4.0E-5 score: 25.7
None	No IPR available	GENE3D	1.10.238.10		coord: 342..436 e-value: 1.0E-7 score: 33.5
IPR039647	EF-hand domain pair protein CML-like	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 23..441
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 356..368
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 21..86
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 254..433

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig864	contig	L-elsbetiae_contig864:14382..22579 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig864.17675.1	mRNA_L-elsbetiae_contig864.17675.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig864 14382..30576 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig864.17675.1 ID=prot_L-elsbetiae_contig864.17675.1|Name=mRNA_L-elsbetiae_contig864.17675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=476bp
MAMNCAEFRQVFEGVLANPTEHFSLFDTRGKGLVDVSEVFASAFLFAAGT
PRGLDAKLDKLWQLFDFDHNGSLDDVEAEIMLECVVRGASRVAMMPQPED
VLDSIGKLTVSLFSHSKRQAVAGELILRDLQEWISEREDVATFLHNFTEA
RLIMSSLELVEESVALGMDMCKRAASQDDVSEEHKNGTVDALQAGEILRS
LVTVGNMECVKAGMEAVIEADADAVVRMLTGSPGVSSGGREKRVDVQALE
GLLRFWVAFSVVDEDGVGSVSVGDLKARGLPRYNIFLQTALLWLGGGTVG
EEPSEATVQKTANDIDESQDGLIKRMEWIRYTAVLDEGKGIVGYDGELLK
VFRRYDDDRSGSITAHEMITMVRDSVTDAIAEVPDCCLRPGMQPVVDTLV
KDIARDLVAVMDVTGSGMLGWTDFKKNQNLVTTRLATLREFVFSAALHRG
GAAATAAAAEASQGANTSRRPDKTIR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR039647	EF_hand_pair_protein_CML-like
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair