prot_L-elsbetiae_contig862.17654.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig862.17654.1
Unique Nameprot_L-elsbetiae_contig862.17654.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length223
Homology
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BLAST of mRNA_L-elsbetiae_contig862.17654.1 vs. uniprot
Match: A0A6H5L3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V4_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.410e-58
Identity = 124/222 (55.86%), Postives = 148/222 (66.67%), Query Frame = 0 
Query:    1 MKLLLLLLALARCRSFLVVPAPLAPGTTSXXXXXXXXPGQLSSRRTQQQHRGPPSRLSSSPRMSPEDLDEARQRLIASSSYKQMVDRVDGNSPFADLDGSTGSSSSRGVKEEEVAEAPSVSFLRQAARAAVDVAVAFVPVALVVTLVKFPPPVVEALSSAAAAVKASPLEPVLEALPWEPNVVLKCVTLAVVAILLSPVADRLVVSPSIHLWAQARIRSMSS 222
            +++L+LL ALARC SFL  P+PL PG TS                 Q +H+GPP  L S+   SPED+DE RQRL+ASS Y +MV R++GNSPF +  G  GS      KE E  E+P +  LRQ  R  VDVAV  VPV LVVT  K PPP++EAL SAA A+K SPLEPVLEALPWEP VVLK      VA+LLSPV DRLVVSP+IH W QA++RS+SS
Sbjct:    5 LRVLVLLTALARCGSFLFAPSPLVPGITSHAEHALCR---------QARHQGPPRHLMSTAGNSPEDIDEVRQRLMASSKYDEMVGRIEGNSPFLEA-GDKGS-----AKEGE--ESPILPVLRQTVRVVVDVAVGLVPVVLVVTYAKLPPPLLEALGSAATAIKGSPLEPVLEALPWEPVVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS 209
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BLAST of mRNA_L-elsbetiae_contig862.17654.1 vs. uniprot
Match: D8LQA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA5_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 4.950e-47
Identity = 97/159 (61.01%), Postives = 115/159 (72.33%), Query Frame = 0 
Query:   64 SPEDLDEARQRLIASSSYKQMVDRVDGNSPFADLDGSTGSSSSRGVKEEEVAEAPSVSFLRQAARAAVDVAVAFVPVALVVTLVKFPPPVVEALSSAAAAVKASPLEPVLEALPWEPNVVLKCVTLAVVAILLSPVADRLVVSPSIHLWAQARIRSMSS 222
            SPED+DE RQRL+ASS+Y +MV R++GNSPF +  G  GS      KE E  E+P +  LRQ  R  VDVA+  VPV LVVT  K PPP++EAL SAA  +K SPLEPVLEALPWEP VVLK      VA+LLSPV DRLVVSP+IH W QA++RS+SS
Sbjct:    7 SPEDIDEVRQRLMASSNYNEMVGRIEGNSPFLEA-GDKGS-----AKEGE--ESPILPVLRQTVRVVVDVAITLVPVVLVVTYAKLPPPLLEALGSAATTIKGSPLEPVLEALPWEPAVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS 157
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig862.17654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3V4_9PHAE1.410e-5855.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA5_ECTSI4.950e-4761.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..222
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.837

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig862contigL-elsbetiae_contig862:8942..11744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig862.17654.1mRNA_L-elsbetiae_contig862.17654.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig862 8932..12131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig862.17654.1 ID=prot_L-elsbetiae_contig862.17654.1|Name=mRNA_L-elsbetiae_contig862.17654.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MKLLLLLLALARCRSFLVVPAPLAPGTTSAAAAAAAEPGQLSSRRTQQQH
RGPPSRLSSSPRMSPEDLDEARQRLIASSSYKQMVDRVDGNSPFADLDGS
TGSSSSRGVKEEEVAEAPSVSFLRQAARAAVDVAVAFVPVALVVTLVKFP
PPVVEALSSAAAAVKASPLEPVLEALPWEPNVVLKCVTLAVVAILLSPVA
DRLVVSPSIHLWAQARIRSMSS*
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