prot_L-elsbetiae_contig8615.17649.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8615.17649.1
Unique Nameprot_L-elsbetiae_contig8615.17649.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length180
Homology
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: D8LKK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK4_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.440e-91
Identity = 152/179 (84.92%), Postives = 160/179 (89.39%), Query Frame = 0
Query:    1 MANLEEGMPTPYIPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIAQAKKDXXXXXXXXXXXXXXXXXXXSQANVKKKGKKKGKR 179
            MAN E+GMPTPYIPP+KN+LYV+P EALR MDVSKLIVIWPNNVDSTRTIK+GRRIP+ASGCPSPTVEDMS VLEFLQLWHAVEPYKAYPREPWVLGRVRVRL DEDGVPWNPEVPDRPSLMKKMGELMPNLKSR DRI++AKKD     XXXXXXXXXXXXXX        GKKKGKR
Sbjct:   25 MANFEDGMPTPYIPPDKNSLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 203          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A836CKP4_9STRA (Signal recognition particle, SRP19 subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 8.680e-36
Identity = 63/145 (43.45%), Postives = 96/145 (66.21%), Query Frame = 0
Query:    1 MANLEEGMPTPYIPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIAQAKKD 145
            M ++E+       PP+K   Y+ P + +  +D SK IV+WPN +D  +TI +GRR+ +   C  P V ++  + +   LW+A+EP+K YPREP+VLGRVRVR+   DG P +P++PD+ +L+KKMG L+PNL  R+DR+ Q  K+
Sbjct:    5 MKSMEDEQQELPPPPDKTLSYLWPDD-MGEVDASKWIVVWPNYIDKAKTIAQGRRVAKEFACDIPIVIELGAICQAFNLWYALEPFKGYPREPYVLGRVRVRVTMPDGTPAHPDIPDKVALLKKMGTLIPNLHIRKDRLLQMSKE 148          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A7S2B120_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B120_9STRA)

HSP 1 Score: 127 bits (319), Expect = 9.790e-34
Identity = 64/131 (48.85%), Postives = 85/131 (64.89%), Query Frame = 0
Query:   15 PNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIAQAKKD 145
            PN NT    PP     +D +K I +WP+N++S RT+ KGRR+P +  C  P V +MS VL+F +L H +EPYK YPR+    GRV+V+L DED  P + EVP R  LM KMGEL+P LK R  R+  AK++
Sbjct:   37 PNPNTKISWPPSMAGKLDDAKFICVWPSNINSKRTLAKGRRVPISHSCEDPIVAEMSEVLQFYKLNHVIEPYKCYPRDWTYPGRVKVKLFDEDDQPCSEEVPSRRVLMMKMGELIPKLKIRNKRMEMAKRN 167          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A6V2W292_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2W292_HETAK)

HSP 1 Score: 118 bits (295), Expect = 1.780e-29
Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = 0
Query:   32 DVSKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIAQ 141
            D S+ I +WPNN++S +T+K+GRRI +   C  P VEDMS V ++LQL H  +PYK YPR+    GR+ VRL  EDG P+NP+VP R +L+ +MG L+P L +R+ R+ Q
Sbjct:  107 DYSRFITLWPNNLNSKKTVKQGRRIGKEQACEDPIVEDMSEVCQYLQLHHVKQPYKGYPRDWLCQGRLLVRLTREDGTPYNPKVPTRRALLVEMGRLIPKLSNRQRRLQQ 216          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A7S2SLH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.700e-28
Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 0
Query:    5 EEGMPTPYIPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIA 140
            EE   TP + P+ NT    P      +D S+ +VIW  N++ +  + +GRRIP AS C  P V +MS VL+  +L H +EP+K YPR   V GRVRV+L+D++  P NPEVP R  LM +MGEL+P LK R  RIA
Sbjct:   29 EEIYHTP-VAPDPNTKITWPQSLAGKIDDSRFLVIWTININRSFKLSEGRRIPIASACEDPIVAEMSEVLQHFKLTHVIEPFKVYPRV-MVPGRVRVKLIDDEDQPCNPEVPTRRVLMMRMGELIPKLKIRSQRIA 162          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A6A3TTV6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TTV6_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.470e-26
Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = 0
Query:   36 LIVIWPNNVDSTRTIKKGRRIPQASG--CPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRI 139
            L+  +PN +DS +T+++GRRIPQA    C +P  ++MS V  +L+L H +EP K YPR+  V GRVRVRLV +DG P NPEVP R +LM KM EL+P L+SR+ R+
Sbjct:  124 LMTFYPNYIDSKKTVQQGRRIPQAQAQACETPLADEMSEVCTYLKLPHVLEPAKKYPRDWLVSGRVRVRLVRDDGSPENPEVPTRKALMVKMAELIPKLQSRKLRL 229          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A067CX32_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CX32_SAPPC)

HSP 1 Score: 109 bits (272), Expect = 9.880e-26
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   32 DVSKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIAQAKKDXXXXXXXXXXXXXXXXXXXSQANVKKKGKKKGKR 179
            D S+    +PN +DS +T   GRRIP+A  C  P VE+M+ V  + +L H  EPYKAY R+  V GRVRV+LVD +G P + E+  R  LM KMGEL+P L+ R+DR+A+                       + A+ KKKGKKKG+R
Sbjct:  155 DFSRWATFYPNYIDSGKTNADGRRIPKAMACDRPIVEEMAEVCRYFKLDHVTEPYKAYSRDFLVPGRVRVKLVDANGSPVHAEIRTRKDLMLKMGELIPKLQLRKDRLARE-------LEAAKAATTGAPATGAAASSKKKGKKKGRR 295          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A8J5IME7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IME7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.180e-25
Identity = 49/106 (46.23%), Postives = 76/106 (71.70%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRI 139
            S  +  +PN +D+ +T+++GRRIP+ + C +P  ++MS V  + +L H +EP K YPR+  V GR+RVRLV +DG P NP++P+R +LM KM EL+P L+SR+ R+
Sbjct:   54 SSFMTFYPNYIDNKKTVQQGRRIPKQNACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLVRDDGSPENPDIPNRKTLMIKMAELIPKLQSRKVRL 159          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: M4BW27_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW27_HYAAE)

HSP 1 Score: 105 bits (262), Expect = 3.070e-25
Identity = 52/106 (49.06%), Postives = 75/106 (70.75%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRI 139
            S     +PN +DS RT+++GRRIP++  C +P  ++MS V  FL+L H +EP K YPR+  V GR+RVRLV EDG   NPE+P+R +L+ KM +L+P L+SR+ R+
Sbjct:   52 SMFYTFYPNYLDSKRTVQQGRRIPKSMACEAPIADEMSEVCTFLKLPHVLEPTKKYPRDWLVAGRIRVRLVREDGSLENPELPNRKALILKMADLIPKLQSRKVRL 157          
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Match: A0A225WA95_9STRA (Transmembrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WA95_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.330e-24
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRI 139
            S     +PN +D+ +T+++GRRIPQ   C  P  ++MS V  + +L H +EP K YPR+  V GR+RVRLV +DG P N E+P+R +LM KM EL+P L+SR+ R+
Sbjct:  132 STFFTFYPNYIDNKKTVQQGRRIPQEKACEKPIADEMSEVCTYFKLPHVLEPSKKYPRDWLVSGRIRVRLVRDDGTPENAEIPNRKTLMVKMAELIPKLQSRKVRL 237          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8615.17649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKK4_ECTSI1.440e-9184.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKP4_9STRA8.680e-3643.45Signal recognition particle, SRP19 subunit n=1 Tax... [more]
A0A7S2B120_9STRA9.790e-3448.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2W292_HETAK1.780e-2950.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SLH7_9STRA1.700e-2847.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6A3TTV6_9STRA7.470e-2652.83Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A067CX32_SAPPC9.880e-2643.24Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8J5IME7_9STRA1.180e-2546.23Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
M4BW27_HYAAE3.070e-2549.06Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A225WA95_9STRA1.330e-2447.17Transmembrane protein n=1 Tax=Phytophthora megakar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002778Signal recognition particle, SRP19 subunitPFAMPF01922SRP19coord: 38..130
e-value: 4.2E-22
score: 78.9
IPR002778Signal recognition particle, SRP19 subunitPANTHERPTHR17453SIGNAL RECOGNITION PARTICLE 19 KD PROTEINcoord: 29..178
IPR036521Signal recognition particle, subunit SRP19-like superfamilyGENE3D3.30.56.30coord: 25..145
e-value: 2.8E-30
score: 107.1
IPR036521Signal recognition particle, subunit SRP19-like superfamilySUPERFAMILY69695SRP19coord: 29..134
NoneNo IPR availablePANTHERPTHR17453:SF0SIGNAL RECOGNITION PARTICLE 19 KDA PROTEINcoord: 29..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8615contigL-elsbetiae_contig8615:807..2967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8615.17649.1mRNA_L-elsbetiae_contig8615.17649.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8615 795..3120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8615.17649.1 ID=prot_L-elsbetiae_contig8615.17649.1|Name=mRNA_L-elsbetiae_contig8615.17649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MANLEEGMPTPYIPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTI
KKGRRIPQASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVR
VRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRIAQAKKDKEASA
RAEKEKAAAAIAAASQANVKKKGKKKGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002778Signal_recog_particle_SRP19
IPR036521SRP19-like_sf