prot_L-elsbetiae_contig86.17635.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig86.17635.1
Unique Nameprot_L-elsbetiae_contig86.17635.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length796
Homology
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BLAST of mRNA_L-elsbetiae_contig86.17635.1 vs. uniprot
Match: D7FT26_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT26_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.300e-10
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0 
Query:  163 RNIKRFDALSSRQPSPASSLRSSPAEGEDAAAAEEGDQADGKL-STKRCGFEGCRKRPTYGVEGSRVAKFCSPHAEQGM 240
            RN+KR D+   R  + + SL S PA G+       GDQ  GKL STKRC F  CRKRPTYGVEGS+ A+FC+PHA+ GM
Sbjct:    5 RNVKRHDSFGLRMQASSLSLPS-PASGDVG-----GDQPGGKLPSTKRCSFPQCRKRPTYGVEGSKTAEFCAPHAQPGM 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig86.17635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT26_ECTSI2.300e-1055.70EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT26... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig86contigL-elsbetiae_contig86:40493..46652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig86.17635.1mRNA_L-elsbetiae_contig86.17635.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig86 40493..46652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig86.17635.1 ID=prot_L-elsbetiae_contig86.17635.1|Name=mRNA_L-elsbetiae_contig86.17635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=796bp
GRRAEFCSQVSTVHARGYTFAGGVVEADGTRNTRFCAPHAKPGAVNVSKR
RCSQPGCLKHPSCCTKGDKTTCYSVDHSRDGMPDLYTYRICAQDGWVKHP
TYGLPGTRKAEFCAPHALDGMVNVSATQCLHVNCTKQPSYGAPGTRKAQF
CVQHAEEGHVDVRNIKRFDALSSRQPSPASSLRSSPAEGEDAAAAEEGDQ
ADGKLSTKRCGFEGCRKRPTYGVEGSRVAKFCSPHAEQGMVNVSRRRCGR
AGCIKHPSYGVRGTKTTEFCAQHALPGMVDVWGKRCAYPGCAKHPTYGVA
GSKRAEFCAPHAVAGMVNVSAKRCGNTKCTKQPSFGYNGSRTAHFCVQHA
EKGMVDVRNTRRCALDGCANHLTYGPAGTKMTEYCLQHSLAGEGGDHAGS
PSPVKLAVKECAHRGCTRQPHTDTAPTGTGAGGGGSSSGAGGTGTGTGTG
NPGGKRCGLAGCTEHVALGGAEFCVRHVDSRDRKPAGVPDNRCAHPDCPK
YPSYGQAGSWIPEFCVQHVESGMVDVRNKICCHPGCAKHPTYVVVGGTKT
ALFCAPHAKGGMLNVSAKKCGWEGCTKQPSFGFSGSRTAHFCVQHAEESM
VDVRNAKRCAYPRCSKHPSYGEAGSKRPTLCAPHALEGMVNVLNSKRAGE
NSGSNSGSPGSGGSGGSGSSDSGSGAHGPAGYFVVAPAGNGRVKQEPSLY
GNDGGPAPAAVPIAAGLVVGDWVADGAVVKDWVGNGNKCHYGGVEGQEET
EHEQKLKHEGPFPPMPMWDQQPSGDRPAARPYLGFSKRRRMMDNV*
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