prot_L-elsbetiae_contig857.17607.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig857.17607.1
Unique Nameprot_L-elsbetiae_contig857.17607.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
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BLAST of mRNA_L-elsbetiae_contig857.17607.1 vs. uniprot
Match: D7FT14_ECTSI (Putative AAA family ATP ase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT14_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.650e-11
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   19 RFVRRLYVPLLNKSGRRQLVNILLKTSPSSLTADDVEEAVEG 60
            RFV+RLYVPL +KSGRRQL+NILLKTS SSLTA+DVE  VEG
Sbjct:  396 RFVKRLYVPLPDKSGRRQLMNILLKTSVSSLTAEDVETVVEG 437
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BLAST of mRNA_L-elsbetiae_contig857.17607.1 vs. uniprot
Match: A0A6H5JMF7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF7_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.240e-11
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   19 RFVRRLYVPLLNKSGRRQLVNILLKTSPSSLTADDVEEAVEG 60
            RFV+RLYVPL +K+GRRQL+NILLKTS SSLTA+DVE  VEG
Sbjct:  666 RFVKRLYVPLPDKTGRRQLMNILLKTSVSSLTAEDVETVVEG 707
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig857.17607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT14_ECTSI1.650e-1180.95Putative AAA family ATP ase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JMF7_9PHAE4.240e-1178.57AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig857contigL-elsbetiae_contig857:12486..12869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig857.17607.1mRNA_L-elsbetiae_contig857.17607.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig857 12430..12869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig857.17607.1 ID=prot_L-elsbetiae_contig857.17607.1|Name=mRNA_L-elsbetiae_contig857.17607.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
MKRRGEVSSPAICVEKTNRFVRRLYVPLLNKSGRRQLVNILLKTSPSSLT
ADDVEEAVEG
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