prot_L-elsbetiae_contig8554.17586.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8554.17586.1
Unique Nameprot_L-elsbetiae_contig8554.17586.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length201
Homology
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BLAST of mRNA_L-elsbetiae_contig8554.17586.1 vs. uniprot
Match: D7FTX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX4_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.010e-26
Identity = 94/204 (46.08%), Postives = 111/204 (54.41%), Query Frame = 0 
Query:    1 MSVSSHESLSKPGGDDHQDHDVISQGQRSRASSVLSDVIDRGFYGEDDAQRGGGDENRRPVGSSARPAALSLSF-SGGLQGNQKSGENVMLEAPGCHQARDNSFNAAGGMVDGDDKENN---VGAVGEGKREXXXXXXXXXXXXXXXXAFGTGGCSVAADKQLSGQKRGGGDIAIEKQKSFTGSYFQVSPGSFLQSSKRQRHFS 200
            MSVSS  SLSK GG   +  D  SQG RSRASSV+SDVI+ G   +D  Q      + +P  S A PA L L   +    G+ K+   + L    C  +      A G   DG+DKEN+    G VG GK+                     G   + A KQLSGQKR GGDI IEKQKSFTGSYFQVSP SFLQSSKRQR+F+
Sbjct:  213 MSVSSRGSLSKQGG---RGDDDASQGLRSRASSVISDVIEGGVLNDDSRQN---KASSQP--SLANPALLPLEGKTDNEDGSYKTPIRLRLS---CETS------AGGTATDGEDKENSQVGAGFVGGGKKRE-------------------GEAVLEAKKQLSGQKRAGGDIDIEKQKSFTGSYFQVSPSSFLQSSKRQRNFA 380
[Close]
BLAST of mRNA_L-elsbetiae_contig8554.17586.1 vs. uniprot
Match: A0A6H5KL22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL22_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 2.970e-25
Identity = 94/206 (45.63%), Postives = 110/206 (53.40%), Query Frame = 0 
Query:    1 MSVSSHESLSKPG--GDDHQDHDVISQGQRSRASSVLSDVIDRGFYGEDDAQRGGGDENRRPVGSSARPAALSLSF-SGGLQGNQKSGENVMLEAPGCHQARDNSFNAAGGMVDGDDKENN---VGAVGEGKREXXXXXXXXXXXXXXXXAFGTGGCSVAADKQLSGQKRGGGDIAIEKQKSFTGSYFQVSPGSFLQSSKRQRHFS 200
            MSVSS  SLSK G  GDD       SQG RSRASSV+SDVI+ G   +D  Q      N +P  S A PA L L   +    G+ K+   V L    C  +      A G   DG DKEN+    G VG GK+                     G  ++ A KQ+SGQKR GGDI  EKQKSFTGSYFQVSP SFL+SSKRQR+F+
Sbjct:    1 MSVSSRGSLSKQGARGDDD-----ASQGLRSRASSVISDVIEGGGLNDDSRQN---KANSQP--SLAIPALLPLEGKTDNEDGSYKTPSRVRLS---CETS------AGGTAADGADKENSQVGAGLVGGGKKRE-------------------GDAALEAKKQISGQKRTGGDI--EKQKSFTGSYFQVSPSSFLKSSKRQRNFA 166
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8554.17586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX4_ECTSI1.010e-2646.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL22_9PHAE2.970e-2545.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8554contigL-elsbetiae_contig8554:1612..6030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8554.17586.1mRNA_L-elsbetiae_contig8554.17586.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8554 613..7805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8554.17586.1 ID=prot_L-elsbetiae_contig8554.17586.1|Name=mRNA_L-elsbetiae_contig8554.17586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=201bp
MSVSSHESLSKPGGDDHQDHDVISQGQRSRASSVLSDVIDRGFYGEDDAQ
RGGGDENRRPVGSSARPAALSLSFSGGLQGNQKSGENVMLEAPGCHQARD
NSFNAAGGMVDGDDKENNVGAVGEGKREKGKGGGGGGGGGGAGAAFGTGG
CSVAADKQLSGQKRGGGDIAIEKQKSFTGSYFQVSPGSFLQSSKRQRHFS
*
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