prot_L-elsbetiae_contig8535.17568.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8535.17568.1
Unique Nameprot_L-elsbetiae_contig8535.17568.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length542
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8535.17568.1 vs. uniprot
Match: D8LEB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB4_ECTSI)

HSP 1 Score: 616 bits (1589), Expect = 2.670e-214
Identity = 348/568 (61.27%), Postives = 391/568 (68.84%), Query Frame = 0 
Query:    1 CCCAAVINPQAAGEDRVWKNLCHQRWRRVNVYVD-------PGRGRGSGGHQAAYASLNGWRDPRRRLRRIILSTNPGAAAAGQRVTRAARAAAVGGGNATNISGMDVGPSRVVVCSADTAWYYGIRQASG-ALQHQQDPREDRSQSQSQQRRVHPSQDEAGTAVRREGTRGDTAEFTLEASLEAGRGAAVSPASVRGIRLPSPCVTEARFSGDGERCFFGSMSGDVYVHEFGG------GGGEHNFGAAAGWTPILALTSPEGSPVAVRQVVSTFDGGCSRGSRLGVLCRPPSGWQPNSEGTG-GGYLFLVDSQTQEVTRRMKLGGGSLEGLKFPTMERGGTAVSTAPLSSEGTPFGSTG-GELFAVGFRGGTVTLYDARCQGGAGGMVGAFVTRHRWLERVRTAGPLLMASYGRSKNIETWDIRKLPSSPAREGSPAVPMPGPPASPRLDDLACAANSPDFWVEPHGLCVAVYGPPRHSQRFGAKHAFWPWP-EPGGCSR-------PARSARGGVRRVEVP-----VPGVVSDSDYRLCLSTGIKFTDTHLATVLDSSRVLVDEM 539
            CC       QAA EDR+WK+LCH+RWRRVNV V         G G   GGHQAAYASLNGWRDP  RLRR ILST P  A  G+R TR A+  A GGG ATNISGMDVGP RVVVCSAD AWYY +RQ S  + Q +Q PR+  S S         S D                                S  ++RG +LPS  VTEAR+SGDGERCFFG++SG ++VH+ GG      G    +  A   WTP LAL+SP GSPVAVRQVV+ F+GGC  GSRLGVLCRP   WQPN EG+G GGYLFLVD+Q Q VTR+M LGGGSL GL FPTMERGG AVS APLSSEG PFGS+G GELFAVGF GGTV ++DARC  G GGMVG F TRHRWL+R+R+AGPLLM SYGR+KNIETWD+R+LPS    E  P +P P   A P L DLAC ANSPDFWVEPHGLCVAV+G PRHSQRFGAKHAFWPWP + GG +        PA SARG    VE+P     VPGVV+DS YR+CLSTG+KFTDTH+ATVLDSSRVLVDEM
Sbjct:   35 CCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDS--------ASIDSXXXXXXXXXXXXXXXXXXXXXXXX------XSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEG-GGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEM 587
[Close]
BLAST of mRNA_L-elsbetiae_contig8535.17568.1 vs. uniprot
Match: A0A6H5KAW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.270e-17
Identity = 46/68 (67.65%), Postives = 49/68 (72.06%), Query Frame = 0 
Query:   10 QAAGEDRVWKNLCHQRWRRVNVYVD-------PGRGRGSGGHQAAYASLNGWRDPRRRLRRIILSTNP 70
            QAA EDR+WK+LCH+RWRRVNV V         G G   GGHQAAYASLNGWRDP  RLRR ILST P
Sbjct:    4 QAAQEDRLWKDLCHRRWRRVNVDVARPNNRTCDGGGGVIGGHQAAYASLNGWRDPTNRLRRTILSTAP 71
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8535.17568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEB4_ECTSI2.670e-21461.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAW4_9PHAE1.270e-1767.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 144..419
e-value: 1.5E-5
score: 25.9
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 96..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8535contigL-elsbetiae_contig8535:3818..8344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8535.17568.1mRNA_L-elsbetiae_contig8535.17568.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8535 3818..8344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8535.17568.1 ID=prot_L-elsbetiae_contig8535.17568.1|Name=mRNA_L-elsbetiae_contig8535.17568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=542bp
CCCAAVINPQAAGEDRVWKNLCHQRWRRVNVYVDPGRGRGSGGHQAAYAS
LNGWRDPRRRLRRIILSTNPGAAAAGQRVTRAARAAAVGGGNATNISGMD
VGPSRVVVCSADTAWYYGIRQASGALQHQQDPREDRSQSQSQQRRVHPSQ
DEAGTAVRREGTRGDTAEFTLEASLEAGRGAAVSPASVRGIRLPSPCVTE
ARFSGDGERCFFGSMSGDVYVHEFGGGGGEHNFGAAAGWTPILALTSPEG
SPVAVRQVVSTFDGGCSRGSRLGVLCRPPSGWQPNSEGTGGGYLFLVDSQ
TQEVTRRMKLGGGSLEGLKFPTMERGGTAVSTAPLSSEGTPFGSTGGELF
AVGFRGGTVTLYDARCQGGAGGMVGAFVTRHRWLERVRTAGPLLMASYGR
SKNIETWDIRKLPSSPAREGSPAVPMPGPPASPRLDDLACAANSPDFWVE
PHGLCVAVYGPPRHSQRFGAKHAFWPWPEPGGCSRPARSARGGVRRVEVP
VPGVVSDSDYRLCLSTGIKFTDTHLATVLDSSRVLVDEMMMV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam