prot_L-elsbetiae_contig8503.17532.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8503.17532.1
Unique Nameprot_L-elsbetiae_contig8503.17532.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length306
Homology
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BLAST of mRNA_L-elsbetiae_contig8503.17532.1 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.290e-122
Identity = 190/275 (69.09%), Postives = 214/275 (77.82%), Query Frame = 0 
Query:   18 SLDPRGLIFPVTTPPPTSWADVQLVAGRVSRHWGLLRGLIEDQKKARKNTFSSSSRLTATLLREAVTRLSLSLEAVDTKDKFSCVPGVGAMILKVGDKHLVAQVTARNPKHQPSSMVFVAAPAAILVAMSREVKRLAAEDDGTG------------AATLWLAQDEIRALAAPLCEEDLSHRGDEIVLGEVENFAWGSMAHLVNEHKFDCMKSKDLDEKSTIAKLEALGKRLVCNSPGCIAYATKSLGELSDRVKIDTFRRSVYCKEHYLEAGGG 280
            +LDPR L FP+T PPPT W DV  V GR SRHWGL+RGL+E+QKKARKN  SSS+RLTATL RE V RLSLSLEAVDTKDKFSC PGVG MI K+G KHL AQVTARNPKHQPS+  FVA+ AAILVAMSREVKR A   D T             A   W  + EIR LAAPLCEEDL+HRGDEIVLGEVENFAW SMA+L N +KFDC+  KDLDEK+TIA+L+ LG+R +C+SPGC AYATKS+G+LS+RVK  TF RSVYC EH+ E GGG
Sbjct:    6 ALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLMEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIQKMGAKHLAAQVTARNPKHQPSNKTFVASAAAILVAMSREVKRRATVVDVTSESNGGKGPPAAAAPAAWFTEKEIRRLAAPLCEEDLTHRGDEIVLGEVENFAWCSMAYLTNHNKFDCVARKDLDEKATIAQLQELGERPICSSPGCNAYATKSMGDLSERVKTATFLRSVYCDEHFKEMGGG 280
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BLAST of mRNA_L-elsbetiae_contig8503.17532.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 1.070e-80
Identity = 150/263 (57.03%), Postives = 171/263 (65.02%), Query Frame = 0 
Query:   18 SLDPRGLIFPVTTPPPTSWADVQLVAGRVSRHWGLLRGLIEDQKKARKNTFSSSSRLTATLLREAVTRLSLSLEAVDTKDKFSCVPGVGAMILKVGDKHLVAQVTARNPKHQPSSMVFVAAPAAILVAMSREVKRLAAEDDGTGAATLWLAQDEIRALAAPLCEEDLSHRGDEIVLGEVENFAWGSMAHLVNEHKFDCMKSKDLDEKSTIAKLEALGKRLVCNSPGCIAYATKSLGELSDRVKIDTFRRSVYCKEHYLEAGGG 280
            +LDPR L FP+T PPPT W DV  V GR SRHWGL+RGLIE+QKKARKN  SSS+RLTATL RE V RLSLSLEAVDTKDKFSC PGVG M            VTARNPKHQPS+  FVA+ AAILVAM                                           +   GEVENFAW SMA+L N +KFDC+  KDLDEK+T+A+L+ LG+R +C+SPGC AYATK +G+LS+RVK  TF RSVYC EHY E GGG
Sbjct:    6 ALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLIEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEM------------VTARNPKHQPSNKTFVASAAAILVAMR------------------------------------FPEFSPDTPTGEVENFAWCSMAYLTNHNKFDCVAKKDLDEKATVAQLQELGERPICSSPGCNAYATKRMGDLSERVKPATFLRSVYCDEHYTEMGGG 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8503.17532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIK4_ECTSI1.290e-12269.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF35_9PHAE1.070e-8057.03ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8503contigL-elsbetiae_contig8503:984..7350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8503.17532.1mRNA_L-elsbetiae_contig8503.17532.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8503 982..7350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8503.17532.1 ID=prot_L-elsbetiae_contig8503.17532.1|Name=mRNA_L-elsbetiae_contig8503.17532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
SRVVHRGKSEREKEMADSLDPRGLIFPVTTPPPTSWADVQLVAGRVSRHW
GLLRGLIEDQKKARKNTFSSSSRLTATLLREAVTRLSLSLEAVDTKDKFS
CVPGVGAMILKVGDKHLVAQVTARNPKHQPSSMVFVAAPAAILVAMSREV
KRLAAEDDGTGAATLWLAQDEIRALAAPLCEEDLSHRGDEIVLGEVENFA
WGSMAHLVNEHKFDCMKSKDLDEKSTIAKLEALGKRLVCNSPGCIAYATK
SLGELSDRVKIDTFRRSVYCKEHYLEAGGGSGRRKKAAGKGKGRGKGKTN
STACDP
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