prot_L-elsbetiae_contig85.17523.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig85.17523.1
Unique Nameprot_L-elsbetiae_contig85.17523.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length501
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig85.17523.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 8.000e-165
Identity = 318/501 (63.47%), Postives = 356/501 (71.06%), Query Frame = 0 
Query:    1 MVWLSSIARRGAPVAGTAASASIRAARPPSSVLAAARLRQLNHRRNDNEAP-LTSSQRRQLSDQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVGEELWIVGRVMEGMDKRLGAKQERIRVREIGVIERYAAVMSTLDGSLEAREGDDFLSWLRSQGFGADTASGADEDGTTNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEAFLSAAAARLNALVADKEESLFGDRGEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAISSPNMSDGDLYQARLGAHRAMLCHCLSLLSSSLSKQQLKSGLSVEEVAAAARTAYLAGPEERLGAIFPLFDTHGDGHLDIEGLERAVDAVVLPVAVAAERCYLAAAKPALDKKVAAVMPATMKYALWDVLEVPVKRRCAFAWAEDRKQVGPDEWRVSWEQFAPSRRKHFPELESVAENYVAEFSKRRSAWHTSRKGRKEAIVYGSALLAFVLFIDDVLKMV 500
            MVWL SIARRGA V G                   AR   L H  N +EA  +   QRRQLS +PAXXXXXXXXXXXXXXX          XXXXXX     GD  EELWIVGRV++ MD RLGAKQE+IRV EIGVIER+AAV+S LDGSLE REGD+FL+WLRSQGF  D AS   + G    XXXX                           VEAFLSAA+ARLNALV DKE++LFGDRGE E             XXXXXXX            + SPNMSD DLYQARLGAHRAMLCH LSLLSSSL KQQLK+GLS+ EV AA R+AYLA PE+RL A++PLFDTHGDGHLD E ++ AVDAVVL V  A+ERCY AAA+PALDKK AAVMPATMKY LWDV+EVP+KRRC+FAWAE+RKQVGPDEWRVSW+QFAPSRR+HFPE++SVA +YVAEFS+RRSAWHTSRKGRKEA+VYGSAL   VL ID++LKMV
Sbjct:    1 MVWLLSIARRGATVVGAXXXXXXX---XXXXXXXEARRPALFHDNNSDEATKVQPQQRRQLSAKPAXXXXXXXXXXXXXXXTGPAAQEKGSXXXXXXSS---GDAAEELWIVGRVLDDMDTRLGAKQEKIRVHEIGVIERFAAVVSALDGSLEPREGDEFLAWLRSQGF--DDASPTPQPGGGPXXXXXETAAGTKVENKCSNGKSEGGAAEERAEVEAFLSAASARLNALVVDKEDALFGDRGEAEAEESLQAKGERGGXXXXXXXGGDAS----GEPVVSPNMSDEDLYQARLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAAPEDRLAAVYPLFDTHGDGHLDTESVDLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEVPMKRRCSFAWAENRKQVGPDEWRVSWDQFAPSRRQHFPEMDSVARDYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLIIDNLLKMV 489
[Close]
BLAST of mRNA_L-elsbetiae_contig85.17523.1 vs. uniprot
Match: A0A836CPD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.520e-17
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0 
Query:  397 MPATMKYALWDVLEVPVKRRCAFAWAEDRKQVGPDEWRVSWEQFAPSRRKHFPELESVAENYVAEFSKRRSAWHTSRKGRKEAIVYGSALLAFVLFID 494
            MP+ ++YA WD L+ P KRRCAFA+AE RKQVGP EW V+ + F  ++R +F +L  V    +      R  WH  RK RK A +YG+ L +  + +D
Sbjct:    1 MPSALRYATWDRLDFPSKRRCAFAFAEGRKQVGPVEWHVTADAFLETQRTYFVDLVRVGGALMDVMEDERWQWHMLRKRRKRAAIYGALLFSATVVLD 98
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig85.17523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE0_9PHAE8.000e-16563.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CPD1_9STRA1.520e-1743.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..478
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 479..497
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 498..500
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig85contigL-elsbetiae_contig85:8853..14065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig85.17523.1mRNA_L-elsbetiae_contig85.17523.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig85 8853..14065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig85.17523.1 ID=prot_L-elsbetiae_contig85.17523.1|Name=mRNA_L-elsbetiae_contig85.17523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=501bp
MVWLSSIARRGAPVAGTAASASIRAARPPSSVLAAARLRQLNHRRNDNEA
PLTSSQRRQLSDQPAPSTAAAAAAAAAAPTGAASASASGDKAKSSSSSAG
GGDVGEELWIVGRVMEGMDKRLGAKQERIRVREIGVIERYAAVMSTLDGS
LEAREGDDFLSWLRSQGFGADTASGADEDGTTNAAAVAPAAAADGSPDGG
DDGGGGGGGAKRRAGVEAFLSAAAARLNALVADKEESLFGDRGEKEAAAA
AAAAAAAAGGGNGGGADEKGAAAKGAAAISSPNMSDGDLYQARLGAHRAM
LCHCLSLLSSSLSKQQLKSGLSVEEVAAAARTAYLAGPEERLGAIFPLFD
THGDGHLDIEGLERAVDAVVLPVAVAAERCYLAAAKPALDKKVAAVMPAT
MKYALWDVLEVPVKRRCAFAWAEDRKQVGPDEWRVSWEQFAPSRRKHFPE
LESVAENYVAEFSKRRSAWHTSRKGRKEAIVYGSALLAFVLFIDDVLKMV
*
back to top