prot_L-elsbetiae_contig8496.17516.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8496.17516.1
Unique Name	prot_L-elsbetiae_contig8496.17516.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	205

Homology

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: D7FZN6_ECTSI (Tetrapyrrole-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN6_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 4.220e-94
Identity = 161/212 (75.94%), Postives = 174/212 (82.08%), Query Frame = 0

Query:    1 MVSSSVIL-VAGLAMLGSSTTTAFTTFASPHSMPARSLA-PSCEGTA-----CRHPSTVAVGVAGRRRAASPLRMSTAEEAPAAAAVQGETSGSGAQQPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            MVS +V++ VAG+AMLGSSTT+AFT+ A   S  +R+ A PSC+  A      RHP       AG RR AS LRMSTAEE PAAAA         A++PTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKR+FVYWTEVKNIPNTD+ATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV
Sbjct:    1 MVSCAVLMAVAGMAMLGSSTTSAFTSPAIIRSQHSRAAARPSCDHAARTQAPSRHP---VAAKAGGRRYASQLRMSTAEETPAAAAAV-------AREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 202

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 2.900e-91
Identity = 160/215 (74.42%), Postives = 174/215 (80.93%), Query Frame = 0

Query:    1 MVSSSVIL-VAGLAMLGSSTTTAFTTFASPHSMPAR----SLAPSCEGTAC-----RHPSTVAVGVAGRRRAASPLRMSTAEEAPAAAAVQGETSGSGAQQPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            MVS +V++ VAG+AMLG STT+AFT  ASP S+ ++    +  PSC+  A      RH    A   AG RR AS LRMSTAEE PAAAA         A++PTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKR+FVYWTEVKNIPNTD+ATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV
Sbjct:    1 MVSCAVLMAVAGIAMLGPSTTSAFT--ASPTSIRSQHSRAAARPSCDHAASTQAPSRHH---AAAKAGGRRYASQLRMSTAEETPAAAAATAV-----AREPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.930e-54
Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 0

Query:   95 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            D P  L S+ GIDYVPLATMLATGD KGADQFTRDALI+AAG GSQKR FVYWT+VKNIPN D+AT+E LWL YS GKFGYSVQ ++W++ KGDFENFCR IGW T   E+
Sbjct:   63 DAPDNLSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEI 173

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO)

HSP 1 Score: 173 bits (438), Expect = 6.620e-51
Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 0

Query:   96 IPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            IPT LPS CG+DYVPLATMLATGDL  ADQFTRDALI+ +GA ++ R FVY+T+VKNIP+TD+ATME LW  +SKGKFGYSVQK  W ++KGDFE FCR+IGWTT D EV
Sbjct:   64 IPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEV 173

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A7S2P4E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4E3_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.110e-48
Identity = 78/111 (70.27%), Postives = 90/111 (81.08%), Query Frame = 0

Query:   95 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            +IPT LPS  G DYVPLATMLATG L  ADQFTRDALI+ +GA ++ R FVYWTEVKNIPN D+AT+E LW  +S GKFGY+VQK  WR++KGDFE FCR+IGWTT D EV
Sbjct:   60 EIPTKLPSAVGKDYVPLATMLATGQLAEADQFTRDALIEISGAKAKGRSFVYWTEVKNIPNEDLATIERLWNKFSGGKFGYTVQKKKWRQSKGDFEAFCRKIGWTTQDGEV 170

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A7S2UF66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF66_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.820e-48
Identity = 86/146 (58.90%), Postives = 104/146 (71.23%), Query Frame = 0

Query:   60 RRAASPLRMSTAEEAPAAAAVQGETSGSGAQQPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            RR  +   MST E AP A +     S   +     +IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+  + R+FVY+TEVKN+P TD+ATME LW  +SKGKFGYSVQK  W+++KGDFE FC +IGWTT D +V
Sbjct:   34 RRQTTSCAMST-EAAPMADSGVPPASSQASDVAEEEIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVIAGSKEKGRDFVYFTEVKNMPATDLATMERLWNKFSKGKFGYSVQKKKWKQSKGDFEAFCSKIGWTTKDGDV 178

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A7S0FNL4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL4_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.550e-48
Identity = 85/147 (57.82%), Postives = 104/147 (70.75%), Query Frame = 0

Query:   59 RRRAASPLRMSTAEEAPAAAAVQGETSGSGAQQPTRDIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            R  A +PL    AE   A + V  ET+         +IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+  + R+FVYWTEVK IP TD+AT+E LW  +S GKFGYSVQK +W+++KGDFE +C++IGWTT D EV
Sbjct:   29 RAMALTPL---AAEATMADSGVPAETAAPSETVEDAEIPTNLPSDVGMDYVPLATMLATGQLVEADQFTRDALIVLAGSKEKGRDFVYWTEVKEIPATDLATIERLWNKFSGGKFGYSVQKRIWKRSKGDFELWCKKIGWTTQDGEV 172

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.710e-48
Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0

Query:   95 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            DIPT LPS+ G+DYVPLATMLATG L  ADQFTRDALI  AG+ ++ R+FVY+TEVKNIP+TD+AT+E LW  +SKGKFGYSVQK  +R+ K DFE FCR+IGWTT D EV
Sbjct:   69 DIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEV 179

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.420e-47
Identity = 77/111 (69.37%), Postives = 89/111 (80.18%), Query Frame = 0

Query:   95 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            +IPT LPS+ G+DYVPLATMLATG L  ADQFTRDALIK  GA  + R FVYWTEVK IP+TD+AT+E LW  +S GKFGYSVQK  WR++K DFE FCR+IGWTT D +V
Sbjct:   76 EIPTNLPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDV 186

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BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Match: A0A448ZNY6_9STRA (GUN4 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNY6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.470e-47
Identity = 74/110 (67.27%), Postives = 90/110 (81.82%), Query Frame = 0

Query:   96 IPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEVKNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEV 205
            IPT LPS+CG+DYVPLATMLATG+ + ADQFTRDALI+ +GA  + R+FVY+T+VK IP TD+AT+E LW  +SKGKFGYSVQK   R  KGDFE FC++IGWTT D +V
Sbjct:   45 IPTNLPSDCGMDYVPLATMLATGNFEDADQFTRDALIEISGAKEKGRDFVYFTDVKRIPTTDLATIERLWYKFSKGKFGYSVQKRQMRLAKGDFEKFCQKIGWTTQDGDV 154

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8496.17516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZN6_ECTSI	4.220e-94	75.94	Tetrapyrrole-binding protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5KVS5_9PHAE	2.900e-91	74.42	GUN4 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A836C7C7_9STRA	5.930e-54	73.87	GUN4 domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A1Z5KQ11_FISSO	6.620e-51	72.73	GUN4 domain-containing protein n=2 Tax=Fistulifera...	[more]
A0A7S2P4E3_9STRA	1.110e-48	70.27	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S2UF66_9STRA	2.820e-48	58.90	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S0FNL4_9STRA	3.550e-48	57.82	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
A0A6S8ZHG1_9STRA	8.710e-48	70.27	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S2R3S6_9STRA	1.420e-47	69.37	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A448ZNY6_9STRA	4.470e-47	67.27	GUN4 domain-containing protein n=1 Tax=Pseudo-nitz...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.25.40.620		coord: 64..169 e-value: 4.2E-25 score: 91.0
None	No IPR available	GENE3D	1.10.10.1770		coord: 170..205 e-value: 3.0E-9 score: 38.9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..205
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.658
None	No IPR available	TMHMM	TMhelix		coord: 5..27
IPR008629	GUN4-like	PFAM	PF05419	GUN4	coord: 102..201 e-value: 8.5E-34 score: 116.6
IPR008629	GUN4-like	PANTHER	PTHR34800	FAMILY NOT NAMED	coord: 84..204
IPR037215	GUN4-like superfamily	SUPERFAMILY	140869	GUN4-like	coord: 100..200

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8496	contig	L-elsbetiae_contig8496:6066..8441 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8496.17516.1	mRNA_L-elsbetiae_contig8496.17516.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8496 6066..8441 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8496.17516.1 ID=prot_L-elsbetiae_contig8496.17516.1|Name=mRNA_L-elsbetiae_contig8496.17516.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MVSSSVILVAGLAMLGSSTTTAFTTFASPHSMPARSLAPSCEGTACRHPS
TVAVGVAGRRRAASPLRMSTAEEAPAAAAVQGETSGSGAQQPTRDIPTTL
PSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKREFVYWTEV
KNIPNTDMATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTT
MDAEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008629	GUN4-like
IPR037215	GUN4-like_sf