prot_L-elsbetiae_contig847.17477.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig847.17477.1
Unique Nameprot_L-elsbetiae_contig847.17477.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length415
Homology
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BLAST of mRNA_L-elsbetiae_contig847.17477.1 vs. uniprot
Match: A0A6H5K9W2_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W2_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 3.610e-59
Identity = 223/315 (70.79%), Postives = 243/315 (77.14%), Query Frame = 0 
Query:    1 AVLRSPVLGYVAESLAPARSTHEMSNFMAKMRGVEFPRDPLREPGPDEHLRQRGGFQRLMASTTFESPFAKKKDKTAGIGYSPLELDEAANESAILEMEDEDDEAKVKDAGRGRKADDGEGSVRAGSSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLKRMSSMSRKMLPKLVASRGRRKIGRDK-QLASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTGLHART------------QESERRE---LVPPMSPALAAPRTPDYSPPSSPAYPSSRPAAEGGTR 299
            AVLRSPVL  VAESLAPARSTHEMS+FM KM+GVEFPRDP+REPGPDEH+RQ GGFQRLMA+TTFESPFAKK  K  GI YSPLELDEAANESA+L+MEDE+DEA          A    G  +A  +P      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +KRMSS +RKMLPKLVA+RGR K+GRD+ Q A+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A T            Q+  RRE   LVPPMSPALA PRTPD SPP+SPAY  + P  E  +R
Sbjct:   89 AVLRSPVLASVAESLAPARSTHEMSDFMTKMKGVEFPRDPMREPGPDEHMRQAGGFQRLMAATTFESPFAKKNKKKLGIDYSPLELDEAANESAVLDMEDEEDEAAANAKNDKNAAGTKVGDNQAPDNPAPGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRMSSFTRKMLPKLVATRGRHKMGRDRGQPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGTAATAGVKSARDLEMEQQQRRREDLDLVPPMSPALAVPRTPDCSPPASPAYHEAEPVFEEDSR 403
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BLAST of mRNA_L-elsbetiae_contig847.17477.1 vs. uniprot
Match: D7FSB5_ECTSI (Dice1/dead/H box polypeptide, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB5_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 1.960e-51
Identity = 151/209 (72.25%), Postives = 168/209 (80.38%), Query Frame = 0 
Query:    1 AVLRSPVLGYVAESLAPARSTHEMSNFMAKMRGVEFPRDPLREPGPDEHLRQRGGFQRLMASTTFESPFAKKKDKTAGIGYSPLELDEAANESAILEMEDEDDEAKVKDAGRGRKADDGEGSVRAGSSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLKRMSSMSRKMLPKLVASRGRRKIGRDK 209
            AVLRSPVL  VAESLAPARSTHEMS+FM KM+GVEFPRDP+REPGPDEH+RQ GGFQRLMA+TTFESPFAKKK K  GI YSPLELDEAANESA+L+MEDE+DEA    A   +   +  G+    +  P            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +KRMSS +RKMLPKLVA+RGR K+GRD+
Sbjct:  739 AVLRSPVLASVAESLAPARSTHEMSDFMTKMKGVEFPRDPMREPGPDEHMRQAGGFQRLMAATTFESPFAKKKKKKLGIDYSPLELDEAANESAVLDMEDEEDEA----AANAKNDKNAAGTKVGDNQAPDSPVPGASAAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRMSSFTRKMLPKLVATRGRHKMGRDR 943
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig847.17477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9W2_9PHAE3.610e-5970.79WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FSB5_ECTSI1.960e-5172.25Dice1/dead/H box polypeptide, putative n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig847contigL-elsbetiae_contig847:1101..5043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig847.17477.1mRNA_L-elsbetiae_contig847.17477.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig847 1101..5044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig847.17477.1 ID=prot_L-elsbetiae_contig847.17477.1|Name=mRNA_L-elsbetiae_contig847.17477.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=415bp
AVLRSPVLGYVAESLAPARSTHEMSNFMAKMRGVEFPRDPLREPGPDEHL
RQRGGFQRLMASTTFESPFAKKKDKTAGIGYSPLELDEAANESAILEMED
EDDEAKVKDAGRGRKADDGEGSVRAGSSPPSEASTTAGQNEQEEGGASSS
ASPLAAAADTDAQGAPPSDAGGGGGAAAAAGLKRMSSMSRKMLPKLVASR
GRRKIGRDKQLASARRGGGGTGTAANGGGAPSQRPPSDAPPPPPPPSSTG
LHARTQESERRELVPPMSPALAAPRTPDYSPPSSPAYPSSRPAAEGGTRS
SDPEQSEPGPKQTDGETSPSPLSPESPLGLSVGDAAAIPTAAATATAAAT
ATVPAACAHPPGAGVPGDAGHGPGADGAANGSSAVFKNAPLLPASGDGGA
APSAAVAAAVAAASA
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