prot_L-elsbetiae_contig8465.17475.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8465.17475.1
Unique Nameprot_L-elsbetiae_contig8465.17475.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length142
Homology
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: D7FR23_ECTSI (KRR-R motif-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR23_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 2.530e-91
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNER 142
            MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKP +IREKKVYTPFPPAQT RKVDEQLESGEFFLNER
Sbjct:  128 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNER 269          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A836CN64_9STRA (KRR1 small subunit processome component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN64_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.890e-72
Identity = 112/141 (79.43%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            MVRNKERFVKRR RLVGPDG+TLKALELLTGCY+LVQGNTV+ MGSY GLKQ RKV+ DCMNN+HPVYNIKTLMIRRELAKDP L  E+W RFLP F+K+NV RKKP  +REK+ YTPFPPAQ   KVD QLESGE+FLNE
Sbjct:  146 MVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVACMGSYAGLKQARKVIVDCMNNIHPVYNIKTLMIRRELAKDPALAGEDWSRFLPSFNKRNVPRKKPRSVREKRAYTPFPPAQLPSKVDLQLESGEYFLNE 286          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A484E2C8_BRELC (KRR-R motif-containing protein 1 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2C8_BRELC)

HSP 1 Score: 224 bits (571), Expect = 2.860e-71
Identity = 106/141 (75.18%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRN+ERFVKRR RLVGPDG+TLKA+ELLT CYVLVQGNTVSAMGSY GL+ VRK+V DC  NVHP+YN+K LMI+RELAKDP LKDENWERFLP F K+NV+ KKP  +REKKVYTPFPPA T  KVD+++ESGE+F+ E
Sbjct:   52 LVRNRERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGSYHGLRNVRKIVEDCFANVHPIYNVKRLMIKRELAKDPKLKDENWERFLPSFKKQNVQTKKPKNVREKKVYTPFPPAPTASKVDQEIESGEYFMKE 192          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A3R7FYI5_9STRA (KRR1 small subunit processome component n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FYI5_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.110e-69
Identity = 106/141 (75.18%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RLVGPDG+TLKA+ELLT CYVLVQGNTVSAMGSY GL+ VRK+V DC  NVHP+YN+K LMI+RELAKDP LKDENWERFLP F K+NV+ KKP  +REKK YTPFPPA T+ KVD+++ESGE+F+ E
Sbjct:  157 LVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGSYHGLRNVRKIVEDCFANVHPIYNVKRLMIKRELAKDPKLKDENWERFLPNFRKQNVQTKKPKRVREKKEYTPFPPAPTVSKVDKEIESGEYFMKE 297          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: G4YLL5_PHYSP (KRR1 small subunit processome component n=12 Tax=Phytophthora TaxID=4783 RepID=G4YLL5_PHYSP)

HSP 1 Score: 222 bits (566), Expect = 3.690e-69
Identity = 105/141 (74.47%), Postives = 122/141 (86.52%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RLVGPDG+TLKA+ELLT CYVLVQGNTVSAMGSY GL+ VRK+V DC  N+HP+YN+K LMI+RELAKDP LKDENWERFLP F K+NV+ KKP  +REKK YTPFPPA T  KVD+++ESGE+F+ E
Sbjct:  158 LVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGSYHGLRNVRKIVEDCFANIHPIYNVKRLMIKRELAKDPKLKDENWERFLPNFKKQNVQTKKPKKVREKKEYTPFPPAPTASKVDKEIESGEYFMKE 298          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A6G0XML2_9STRA (KRR1 small subunit processome component n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XML2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.750e-69
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RLVGPDG+TLKA+ELLT CYVLVQGNTVSAMG Y GL+ VRK+V DC  NVHP+YNIKTLMI+RELAKDP L  ENW+RFLP F KKNV+ KKP ++REKK YTPFPPA T  K+D+++ESGE+F+ E
Sbjct:  137 LVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYSGLRHVRKIVEDCFQNVHPIYNIKTLMIKRELAKDPKLSGENWDRFLPTFKKKNVQTKKPHVVREKKAYTPFPPAPTPSKIDKEIESGEYFMKE 277          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A2D4C0W2_PYTIN (KRR1 small subunit processome component n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0W2_PYTIN)

HSP 1 Score: 222 bits (565), Expect = 5.970e-69
Identity = 106/141 (75.18%), Postives = 124/141 (87.94%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RLVGPDG+TLKA+ELLTGCYVLVQGNTVSAMGSYQGL+ VRK+V DC +N+HP+YN+K LMI+RELAKDP L +E+W RFLPQF KKNV+R KP+ IREKK YTPFPPA    KVD+++ESGEFF+ E
Sbjct:  157 LVRNKERFVKRRQRLVGPDGATLKAIELLTGCYVLVQGNTVSAMGSYQGLRNVRKIVEDCFSNIHPIYNVKRLMIKRELAKDPKLANEDWXRFLPQFKKKNVQRAKPSKIREKKEYTPFPPAXMPSKVDKEIESGEFFMKE 297          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A482SK31_9ARCH (KRR-R motif-containing protein 1 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK31_9ARCH)

HSP 1 Score: 217 bits (553), Expect = 6.450e-69
Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNV-KRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RL+GPDG+TLKALELLT CY+LVQGNTV+AMG ++GLKQVR+VV DCM+N+HP+Y+IKTLMI+RELAKDPNL +E+W RFLP+F KKN+ KR+ P  +REK+ YTPFPPA TL KVD QLESGE+FLNE
Sbjct:   52 IVRNKERFVKRRQRLLGPDGATLKALELLTNCYILVQGNTVAAMGPHKGLKQVRQVVLDCMSNIHPIYHIKTLMIKRELAKDPNLANEDWNRFLPKFKKKNLSKRRTPLKVREKREYTPFPPAPTLSKVDLQLESGEYFLNE 193          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: H3GMC4_PHYRM (KRR1 small subunit processome component n=8 Tax=Phytophthora TaxID=4783 RepID=H3GMC4_PHYRM)

HSP 1 Score: 221 bits (564), Expect = 7.990e-69
Identity = 105/141 (74.47%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RLVGPDG+TLKA+ELLT CYVLVQGNTVSAMG+YQGL+ VRK+V DC  NVHP+YN+K LMI+RELAKDP LKDENWERFLP F K+NV+ KKP  +R+KK YTPFPPA T  KVD+++ESGE+F+ E
Sbjct:  158 LVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGTYQGLRNVRKIVEDCFANVHPIYNVKRLMIKRELAKDPKLKDENWERFLPTFKKQNVQTKKPKKVRDKKDYTPFPPAPTASKVDKEIESGEYFMKE 298          
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Match: A0A1V9ZKL3_9STRA (KRR1 small subunit processome component n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZKL3_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.410e-68
Identity = 104/141 (73.76%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNE 141
            +VRNKERFVKRR RLVGPDG+TLKA+ELLT CYVLVQGNTVSAMG Y GL+ VRK+V DC +NVHP+YNIKTLMI+RELAKDP L+ ENWERFLP F KKN++ KKP ++REK+ YTPFPPAQ   KVD+++ESGE+F+ E
Sbjct:  133 LVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYSGLRHVRKIVEDCFHNVHPIYNIKTLMIKRELAKDPALQGENWERFLPVFKKKNIQTKKPHVVREKREYTPFPPAQLPSKVDKEIESGEYFMKE 273          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8465.17475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR23_ECTSI2.530e-9197.89KRR-R motif-containing protein 1 n=1 Tax=Ectocarpu... [more]
A0A836CN64_9STRA1.890e-7279.43KRR1 small subunit processome component n=1 Tax=Tr... [more]
A0A484E2C8_BRELC2.860e-7175.18KRR-R motif-containing protein 1 n=1 Tax=Bremia la... [more]
A0A3R7FYI5_9STRA1.110e-6975.18KRR1 small subunit processome component n=3 Tax=Ph... [more]
G4YLL5_PHYSP3.690e-6974.47KRR1 small subunit processome component n=12 Tax=P... [more]
A0A6G0XML2_9STRA3.750e-6973.76KRR1 small subunit processome component n=1 Tax=Ap... [more]
A0A2D4C0W2_PYTIN5.970e-6975.18KRR1 small subunit processome component n=1 Tax=Py... [more]
A0A482SK31_9ARCH6.450e-6974.65KRR-R motif-containing protein 1 n=1 Tax=archaeon ... [more]
H3GMC4_PHYRM7.990e-6974.47KRR1 small subunit processome component n=8 Tax=Ph... [more]
A0A1V9ZKL3_9STRA1.410e-6873.76KRR1 small subunit processome component n=3 Tax=Sa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 2..62
e-value: 0.0085
score: 25.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..92
e-value: 1.1E-45
score: 155.7
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 7..95
IPR024166Ribosomal RNA assembly KRR1PANTHERPTHR12581HIV-1 REV BINDING PROTEIN 2, 3coord: 1..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8465contigL-elsbetiae_contig8465:465..2292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8465.17475.1mRNA_L-elsbetiae_contig8465.17475.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8465 450..2292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8465.17475.1 ID=prot_L-elsbetiae_contig8465.17475.1|Name=mRNA_L-elsbetiae_contig8465.17475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp
MVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGL
KQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKK
NVKRKKPTIIREKKVYTPFPPAQTLRKVDEQLESGEFFLNER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR024166rRNA_assembly_KRR1