prot_L-elsbetiae_contig8431.17442.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8431.17442.1
Unique Nameprot_L-elsbetiae_contig8431.17442.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length537
Homology
BLAST of mRNA_L-elsbetiae_contig8431.17442.1 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 1.730e-116
Identity = 225/450 (50.00%), Postives = 277/450 (61.56%), Query Frame = 0
Query:  103 SLLQLNAVREALFPSGYT-RQGTCRSNQFPIQVIHESPFLDRLGLKNGMIATTSRKHDFI----HVVRMSDTSAPYQSPQAEEPLESSMVKRHN--PEATVEARAPDEFTCTRMADISDFEGDVVAWSFGDHPEVLRSPDFEFELEVPDLGRNVPALIGLCSGSVEAVHQNQCLLHPILRCLAGTRETFDPPLRLRFPVGDADSMESGSDRGGHEDAETAYRAHLESAFSALTRENGRSEWGPIHGSIVQVEGGVFVLEVEVSHFCDFALSQDVTVDDGCVELFPLPKLKRESRQFHYHFVNRGSENIVIHLWGAARQRGFLESSRLKAGVGLTSGDVEVETKRKLVTEPATKVYTVTVSGG------SQVCRVLDRIASLTVAWTTQERIKSPDNTG--YELVQVLGSTSMTHKHALVIGSLLEGTRPNIANLRVFDGDFVGRRVMEQI 537
            SL QL  +R+AL   GY  R    R     + +  E         + G I T     D          +S TS P ++ +AE+    SMVK  N  P AT      D      MA+IS F+G V+AWSFG HP VLRS  FEFELEVP LGRNVPALIGL S S E V   +CLLHP++ CLA + E FDPPL LRFPVGD +SMESGSD G  +DAE  YRA+LES FS LTR++  SEW P+ G+I Q + G+FVLEV+VSHFCDFAL Q + VD G VEL  LP+LK +SR+ HYHFVN G+EN+V+H WG  R+RGFLES RLK G GL  GD EVE  R LV  P T VY V V GG      ++ C V++   SLTVA+TTQ+ +++    G  +ELVQV G+  M HKHA++ G L E     + NL+V DG  VG  V  ++
Sbjct:  327 SLQQLKDLRDALVSPGYRHRAEDARIGMAKLTLDGEMRGTPMKAFQRGKIDTDKIFSDEDVEGGTSTTISGTSFPGKAGEAEK---FSMVKPRNARPVATKTRDVRDTTVDGGMAEISGFDGYVMAWSFGQHPAVLRSNGFEFELEVPRLGRNVPALIGLRSSSAEVVDGEKCLLHPVVTCLARSGEVFDPPLCLRFPVGDVNSMESGSDCGS-DDAEVTYRAYLESTFSTLTRKHASSEWVPVDGTIEQTDEGIFVLEVQVSHFCDFALKQAIKVDSGGVELVKLPQLKHKSRRSHYHFVNLGTENLVVHCWGVTRKRGFLESFRLKLGFGLNGGDAEVEATRTLVDAPGTGVYKVDVPGGPVDDPRNEACLVVNGFESLTVAYTTQKTVRAGTLFGSTHELVQVWGTRHMQHKHAMIFGILPESAL--VPNLKVEDGVNVGELVRSKV 770          
BLAST of mRNA_L-elsbetiae_contig8431.17442.1 vs. uniprot
Match: A0A6H5K655_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K655_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 5.840e-106
Identity = 176/333 (52.85%), Postives = 223/333 (66.97%), Query Frame = 0
Query:  207 TRMADISDFEGDVVAWSFGDHPEVLRSPDFEFELEVPDLGRNVPALIGLCSGSVEAVHQNQCLLHPILRCLAGTRETFDPPLRLRFPVGDADSMESGSDRGGHEDA--ETAYRAHLESAFSALTRENGRSEWGPIHGSIVQVEGGVFVLEVEVSHFCDFALSQDVTVDDGCVELFPLPKLKRESRQFHYHFVNRGSENIVIHLWGAARQRGFLESSRLKAGVGLTSGDVEVETKRKLVTEPATKVYTVTVSGGSQVCRVLDRIASLTVAWTTQERIKSPDNTGYELVQVLGSTSMTHKHALVIGSLLEGTRPNIANLRVFDGDFVGRRVMEQI 537
            TRMA ISDFEG+VVAWSFGD P+VLR+ D +F+LEVPDLGRNVP LIGLCS S E V   QCLLHP++RCLA   E+FDP LRLR P+GD  SMESGSD G  +D   + AYRA+L S F+ +TRE+  S W PI G+I Q EGGVFVLEV V HFCDFALSQ ++V  GC+E+ PLPKLK + R+ H+HFVN+G EN+V H  GA  + GF +  ++  G G TS +VE         +PA+     T    S+VCRV     S+TVAWT+Q   + P N  + + QV G + M HKHA+V G L       ++NL+V DG+  G+ V  ++
Sbjct:   14 TRMAAISDFEGEVVAWSFGDSPDVLRNHDLDFDLEVPDLGRNVPTLIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRLPLGDEASMESGSD-GASDDXXXDVAYRAYLASKFTVVTREDASSGWVPIDGTIQQAEGGVFVLEVAVPHFCDFALSQGISVPRGCMEIVPLPKLKGKPRRSHFHFVNQGEENLVAHCRGAVEKTGFWDFFKINLGAGATSANVE---------DPAS-----TNPNKSEVCRVFLGTESVTVAWTSQ---RYPQNARHRIPQVWGFSPMQHKHAMVFGPLSGIDTCQVSNLKVDDGESFGKLVKSKV 328          
BLAST of mRNA_L-elsbetiae_contig8431.17442.1 vs. uniprot
Match: A0A6H5KIZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ7_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 1.500e-101
Identity = 184/340 (54.12%), Postives = 222/340 (65.29%), Query Frame = 0
Query:  205 TCTRMADISDFEGDVVAWSFGDHPEVLRSPDFEFELEV-PDLGRNVPALIGL--CSGSVEAVHQNQCLLHPILRCLAGTRETFDPPLRLRFPVGDADSMESGSDRGGHEDAETAYRAHLESAFSALTRENGRSEWGPIHGSIVQVEGGV-FVLEVEVSHFCDFALSQDVTVDDGCVELFPLPKLKRESRQFHYHFVNRGSENIVIHLWGAARQRGFLESSRLKAGVGLTSGDVEVETKRKLVTEPATKVYTVTVSG----GS--QVCRVLDRIASLTVAWTTQERIKSPDNT-GYELVQVLGSTSMTHKHALVIGSLLEGTRPNIANLRVFDGDFVGRRV 533
            T ++M+ + DF+GDVVAWSFG+  EVLRSPD EFELEV P L +N PAL+GL  CSGS E V+  Q LLH +L CL    E FDPPL LRFPVGD DSMESGS  G  +DAE AYRAHL+S FSA+ R++  SEW PI G IV+++GG  F LEV++SHFCDF LSQ + V+ G  EL  LPK    SR+ HYHF N G++ +V H+WGA R+  F+   R  A V L  G V  E +R LV  P +  Y V V G    GS  QVCR    +   TVAWTTQERI       G++LVQV GST M   H LV+G++     P IANLRV DG+ VGR V
Sbjct:  224 TSSQMSSLQDFKGDVVAWSFGNRAEVLRSPDSEFELEVQPGLNKNYPALVGLGLCSGSAEYVNGEQYLLHCVLTCLTRAGEKFDPPLLLRFPVGDEDSMESGSLDGSQDDAEEAYRAHLQSTFSAVKRDDASSEWVPIGGDIVRMKGGRDFFLEVKISHFCDFGLSQAIDVEVGYTELIELPKKMFSSRKTHYHFANLGTKPLVFHVWGAGRKEVFVNVVRANAAVDLAGGSVGAEMERTLVDVPGSGPYEVHVPGEAGSGSKPQVCRKFVDLEKPTVAWTTQERISPSSGVEGHQLVQVWGSTPMLSGHVLVVGAMAPDATPAIANLRVDDGEDVGRLV 563          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8431.17442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHD4_ECTSI1.730e-11650.00Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
A0A6H5K655_9PHAE5.840e-10652.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIZ7_9PHAE1.500e-10154.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..130
e-value: 3.8E-34
score: 119.8
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 2..106
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 2..106
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8431contigL-elsbetiae_contig8431:3763..7758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8431.17442.1mRNA_L-elsbetiae_contig8431.17442.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8431 3763..7758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8431.17442.1 ID=prot_L-elsbetiae_contig8431.17442.1|Name=mRNA_L-elsbetiae_contig8431.17442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=537bp
LAGPIPAELGKLAALEYLDLKQNQLSGTIPEELGKLTALSQLWLNDNQLT
GPIPPELGKLTALQVLYLNGNQLIGTVPAQLVKLRSLFSLDLENSSLSGP
VPSLLQLNAVREALFPSGYTRQGTCRSNQFPIQVIHESPFLDRLGLKNGM
IATTSRKHDFIHVVRMSDTSAPYQSPQAEEPLESSMVKRHNPEATVEARA
PDEFTCTRMADISDFEGDVVAWSFGDHPEVLRSPDFEFELEVPDLGRNVP
ALIGLCSGSVEAVHQNQCLLHPILRCLAGTRETFDPPLRLRFPVGDADSM
ESGSDRGGHEDAETAYRAHLESAFSALTRENGRSEWGPIHGSIVQVEGGV
FVLEVEVSHFCDFALSQDVTVDDGCVELFPLPKLKRESRQFHYHFVNRGS
ENIVIHLWGAARQRGFLESSRLKAGVGLTSGDVEVETKRKLVTEPATKVY
TVTVSGGSQVCRVLDRIASLTVAWTTQERIKSPDNTGYELVQVLGSTSMT
HKHALVIGSLLEGTRPNIANLRVFDGDFVGRRVMEQI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf