prot_L-elsbetiae_contig8363.17363.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8363.17363.1
Unique Nameprot_L-elsbetiae_contig8363.17363.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length563
Homology
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.470e-26
Identity = 184/436 (42.20%), Postives = 207/436 (47.48%), Query Frame = 0
Query:   13 QLDDGSPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKYCKRKPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAASGGPSAGYCP----------------LPPSGVGSGRG---GKNGVMEARHP------SPSKTVKREATAPAPAAAAAYYQGVSGAARAQMAHASG-----------------------INGGAPAAAALAGLLPLRLEGAATVGAAVGIDTSLHQQQQQQVRWRGQEYGSADADRSGKTQPGWGGLGSHRHGSS---------------SGNVESYGFSRRSSLGSLAGFGMDG-DRRYSLEA------DACGGSLLPFYFAP------------SCESDGEGGGXXXXXXXXXXRAGDGGAAMEARRSSLEDALYGTCYKRASFSG 366
            ++D     LRKSCDYCVRMKRGC GGTPC LCNRRNK CIRS+KKRSGPAKGTKYCKRKPR      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             LPP G G G G   GK G++ A         S SK +KRE                                                    IN   P+ +A  G       G   +GA          QQQQQ+RW  Q+ G A A  SG         GS R GSS               +  ++ +G SRRSSLG+  GFG+DG DRR+ L+A       ACG S LPFYF P                DG GGG                + M ARR+SLE+ALYG CY+RASF G
Sbjct:   15 KMDQEHQALRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIPKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSSLPPFGGGRGAGRGTGKRGMIPALQSGSKLAASLSKKMKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHEIRIINDERPSPSAAVG------GGVLALGAPF--------QQQQQLRWGMQDDGGASASSSGYG-------GSDRSGSSGTDASSGDDPCLDSFTATIDGFG-SRRSSLGN--GFGLDGGDRRFGLDAAAADPASACG-SGLPFYFEPLKSGGXXXXXERGVAVDGPGGGNADAEQVAAV------SMMAARRTSLEEALYGACYRRASFQG 419          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 3.280e-14
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 0
Query:   13 QLDDGSPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKYCKRKPR 73
            Q DDG   LRKSCD CVR+KR CDG  PC LC RR + C RSVK++SGPAKGTKY  R+ R
Sbjct:   54 QQDDGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 4.270e-14
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   16 DGSPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKYCKRKPR 73
            D + +LRKSCDYCVR+KR CDG  PC LC RR+K C RS +K+SGPAKGTKY  R+ R
Sbjct:    5 DPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 62          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: A0A6H5L0Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z1_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.310e-14
Identity = 88/199 (44.22%), Postives = 107/199 (53.77%), Query Frame = 0
Query:  265 GSSSGNVESYGFSRRSSLGSLAGFGMDG-DRRYSLEADAC-----GGSLLPFYFAPSCESDGEGGGXXXXXXXXXXRAGDGGA------AMEARRSSLEDALYGTCYKRASFSGAWQVPXXXXXXXXXXXXXXXXXXXXPHPHHR-------QTSSADGLAWNQLLQQADAANHGQEQEQGVNSGVAAAAAAGSDEPAG 444
            GSS+  ++ +G S RSSLG   GFG +G DRR+ L+  A      GGS LPFYFAP  ES G    XXXXXXX XX      A      +M A R+SLE+ALYG CY+RASF G                          H HH+         SS++GLAWNQLLQQADA       + GV++  AAAAA G+D+P G
Sbjct:  222 GSSTVTIDGFG-SHRSSLGD--GFGFNGGDRRFGLDVAAADPTSNGGSGLPFYFAP-LESGGXXXXXXXXXXXDXXXXXXAEAEQVAAVSMMAARTSLEEALYGACYRRASFEGL-------------APAAVAAPSTLAHSHHQYQPLQYQHPSSSEGLAWNQLLQQADATG-----QWGVHTAAAAAAAEGTDQPTG 398          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 5.680e-14
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   16 DGSPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKYCKRKPR 73
            D + +LRKSCDYCVR+KR CDG  PC LC RR+K C RS +K+SGPAKGTKY  R+ R
Sbjct:   13 DPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 70          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.550e-13
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
Query:   10 GGDQLDDGSPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKYCKRKPR 73
            G    D G   LRKSCD CVR+KR CDG +PC+LC RR + C RSVK++SGPAKGTKY  R+ R
Sbjct:   23 GQPTTDGGRVLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: A0A835Z8Y1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.100e-9
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
Query:   19 PQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKY 67
            PQLR+SC+ CV++KR C G +PC LC R+  EC+R+ K+ SGPAKGT+Y
Sbjct:  410 PQLRRSCNLCVQLKRKCSGDSPCTLCVRKGIECVRAFKRPSGPAKGTRY 458          
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Match: A0A836CI83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI83_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.260e-9
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   13 QLDDG-SPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKECIRSVKKRSGPAKGTKY 67
            QL  G +PQLR+SC+ CV +KR C G  PC LC R+ KECIR+ K+ SGP KG +Y
Sbjct:   43 QLPTGRAPQLRRSCNLCVSLKRKCSGDQPCTLCARKGKECIRTFKRPSGPQKGMRY 98          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8363.17363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LKM5_ECTSI2.470e-2642.20Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
D8LPZ9_ECTSI3.280e-1465.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L009_9PHAE4.270e-1465.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L0Z1_9PHAE4.310e-1444.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF9_ECTSI5.680e-1465.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L7F3_9PHAE1.550e-1360.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8Y1_9STRA3.100e-959.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI83_9STRA5.260e-957.14Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 19..62
e-value: 0.01
score: 22.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 23..57
e-value: 7.8E-5
score: 22.7
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 24..53
score: 8.577
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 20..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8363contigL-elsbetiae_contig8363:541..5300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8363.17363.1mRNA_L-elsbetiae_contig8363.17363.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8363 439..5571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8363.17363.1 ID=prot_L-elsbetiae_contig8363.17363.1|Name=mRNA_L-elsbetiae_contig8363.17363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=563bp
MALPPFTTAGGDQLDDGSPQLRKSCDYCVRMKRGCDGGTPCELCNRRNKE
CIRSVKKRSGPAKGTKYCKRKPRKTPNTSATTATSPSSKPSKSSKASPFS
SISTSFSGAGGASAAATANAASGGPSAGYCPLPPSGVGSGRGGKNGVMEA
RHPSPSKTVKREATAPAPAAAAAYYQGVSGAARAQMAHASGINGGAPAAA
ALAGLLPLRLEGAATVGAAVGIDTSLHQQQQQQVRWRGQEYGSADADRSG
KTQPGWGGLGSHRHGSSSGNVESYGFSRRSSLGSLAGFGMDGDRRYSLEA
DACGGSLLPFYFAPSCESDGEGGGDGGGGGGGDGRAGDGGAAMEARRSSL
EDALYGTCYKRASFSGAWQVPPPPPSAASHHQQQQQQQQQHPHPHHRQTS
SADGLAWNQLLQQADAANHGQEQEQGVNSGVAAAAAAGSDEPAGGRMSAS
HPSATFHPAAISGGRRAGMEIATAAMATAQLQEHGRPSSISMPPPASVLS
SFEAHHAGGGGGGGGGDDDSGSGSGSGSAMPSLRDLLFDTANPSKWPPPL
PLPEMAMVESSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf