prot_L-elsbetiae_contig8333.17341.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8333.17341.1
Unique Nameprot_L-elsbetiae_contig8333.17341.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length141
Homology
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: D8LTR6_ECTSI (Developmental regulator FlbA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.010e-18
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 0
Query:    7 VYAVVELVPMPPLAYKYAHIAFLAISHPPAVYIIIIRPVREVLQHAPGTRSSCEAVFAP---RR---KRARTNPVDDVASQLAAGRGRAVLVDSNRLAAIMSIPPLRASFAEFCRKALCSESFEFLVEVDRFK 133
            V+A +  V M P+ YKY  I  +A+SHPP V++  IRPVREV ++ P  R S +    P   RR   K  R     D  +      G  V +D NRL +IM+  PLR +F EFCR++LC ESF+FLV+V+ FK
Sbjct:  205 VHAGLHYVSMSPMEYKYYTIVLMALSHPPIVWLTNIRPVREVERNIPARRRSRKDFQLPSPYRRWSTKNIRVGVAADENNNSLPWNGE-VYLDDNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFK 336          
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: A0A6H5JIZ3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ3_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 5.390e-18
Identity = 55/126 (43.65%), Postives = 77/126 (61.11%), Query Frame = 0
Query:   19 LAYKYAHIAFLAISHPPAVYIIIIRPVREVLQHAPGTRSSCEA------VFAPRRKRARTNPVDDVA-----SQLAAGRGRAVLVDSNRLAAIMSIPPLRASFAEFCRKALCSESFEFLVEVDRFK 133
            LA+KY  + F+ ISHPP V+I+ IRP++EVL HAP  R+S           + RR+   T+ +   A     SQ  +   R   V+SNRLA IM+  PLR +F EFC+K+LCSESF+FL++   F+
Sbjct:  208 LAFKYFFVIFITISHPPIVWILNIRPIQEVLHHAP--RNSIPKGVQVLLALSSRRRGGITSTIVGEAVTPDVSQNPSRHSRESYVESNRLAGIMNYLPLREAFGEFCQKSLCSESFQFLLDASEFR 331          
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: A0A6H5KX00_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX00_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.020e-16
Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 0
Query:   16 MPPLAYKYAHIAFLAISHPPAVYIIIIRPVREVLQHAPGTRSSCEAVFAPR--RKRARTNPVDDVASQ----LAAGRGRAVLVDSNRLAAIMSIPPLRASFAEFCRKALCSESFEFLVEVDRFK 133
            M P  Y+Y  I   A+ HPP V++I IRPV EV ++ P  R S ++   P   R+R+  N    VA+          G A L D NRL +IM+  PLR +F EFCR++LC ESF+FLV+V+ FK
Sbjct:  214 MSPTEYQYCKITLTALLHPPIVWLINIRPVLEVGRNIPARRRSRKSFHLPSPFRRRSTKNIRVGVAADEDINTLPWNGEAYLND-NRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFK 336          
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: D7G0P5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P5_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.140e-14
Identity = 51/138 (36.96%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    7 VYAVVELVPMPPLAYKYAHIAFLAISHPPAVYIIIIRPVREVLQHAPGTRSSCEA------VFAPRRKRARTNPVDDVA-----SQLAAGRGRAVLVDSNRLAAIMSIPPLRASFAEFCRKALCSESFEFLVEVDRFK 133
            V+  ++++P+  LA+KY  +  + +SHP  V+I+ IRP++EVL HAP  R+S           + RR+   ++ +   A     +Q  +  GR   VDSNRLA IM+  PLR +F EFC+K+ CSE   FL++   F+
Sbjct:   49 VFTAIQVLPLSTLAFKYFSVVSMTLSHPAIVWILNIRPIQEVLHHAP--RNSIPKGVQMLLALSSRRRGGSSSAIGGEAVTTDVTQNPSQHGRESYVDSNRLAGIMNYLPLREAFGEFCQKSFCSE---FLLDASEFR 181          
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: A0A6H5KEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ0_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.110e-11
Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 0
Query:   13 LVPMPPLAYKYAHIAFLAISHPPAVYIIIIRPVREVLQHAPGTRSSCEAVFA------PRRKRARTNPV---------DDVASQLAAGRGRAVLVDSNRLAAIMSIPPLRASFAEFCRKALCSE 121
            LVPM PLA+KYAH+A  AIS+ P ++I+ I+PVRE+L +  G  +S    F       P R   + +             V SQ+ +       +D      IM+  PLR +F EFCRKALCSE
Sbjct:    4 LVPMQPLAFKYAHVAHTAISYSPVIWIVNIQPVREILSNNYGCTNSTLDGFCLLYGIIPWRSTVKASRTVLPAASAHRSPVHSQICSDAYLGTPLDD-----IMNFLPLREAFGEFCRKALCSE 122          
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: A0A6H5JD29_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD29_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.180e-7
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   42 IRPVREVLQHAPGTR--SSCEAVFAPRRKRARTNPV---DDVASQLA---AGRGRAVLVDSNRLAAIMSIPPLRASFAEFCRKALCSE-----SFEFLVEVDRFK 133
            IRP++EVL HAP        + + A   +R R++     + V + +    +   R   VDSNRLA +M+  PLR +F EFC+K+LCSE     SF FL++  +FK
Sbjct:   29 IRPIQEVLHHAPRNSIPKGVQMLLALSSRRRRSSAAIGGEAVTADVTHNPSRHSRESYVDSNRLAGLMNYLPLREAFGEFCQKSLCSEISRCVSFRFLLDASKFK 133          
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Match: A0A6H5K562_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K562_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 9.060e-7
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   96 RLAAIMSIPPLRASFAEFCRKALCSESFEFLVEVDRFKA 134
            RLA IM   PL  +F EFCRKALC ESF+FLV+V +FK+
Sbjct:   18 RLATIMGFLPLEHAFGEFCRKALCHESFQFLVDVSKFKS 56          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8333.17341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LTR6_ECTSI2.010e-1843.61Developmental regulator FlbA n=1 Tax=Ectocarpus si... [more]
A0A6H5JIZ3_9PHAE5.390e-1843.65RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KX00_9PHAE6.020e-1643.55RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0P5_ECTSI1.140e-1436.96RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KEZ0_9PHAE5.110e-1138.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD29_9PHAE1.180e-738.10RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K562_9PHAE9.060e-764.10RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1850coord: 86..141
e-value: 3.8E-6
score: 28.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
IPR016137RGS domainPROSITEPS50132RGScoord: 96..141
score: 10.024

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8333contigL-elsbetiae_contig8333:2593..5971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8333.17341.1mRNA_L-elsbetiae_contig8333.17341.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8333 2593..5978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8333.17341.1 ID=prot_L-elsbetiae_contig8333.17341.1|Name=mRNA_L-elsbetiae_contig8333.17341.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
MTAVLFVYAVVELVPMPPLAYKYAHIAFLAISHPPAVYIIIIRPVREVLQ
HAPGTRSSCEAVFAPRRKRARTNPVDDVASQLAAGRGRAVLVDSNRLAAI
MSIPPLRASFAEFCRKALCSESFEFLVEVDRFKAGADDEVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS