prot_L-elsbetiae_contig832.17324.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig832.17324.1
Unique Nameprot_L-elsbetiae_contig832.17324.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length357
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig832.17324.1 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 8.450e-21
Identity = 171/392 (43.62%), Postives = 192/392 (48.98%), Query Frame = 0 
Query:    1 MVVLEAPFP--KTVARHPSGGLKRRGLPSSDAAVASAANTGA--ADNSFAHSKLLGVMRDPESSLLPRAVSEYMIGSMADFSASTAGASSGAAAPVSGGSVVDVIDGVAASRLPPPKTAPVEAVXXXXXXXXXXXXXXXXTPGCVGDEASEYSHSSLLATAAAAPTPGSANVRRGSSGSDNLLTR----------------SISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLPTLSS-TASPE-SRSQSFTASELNGXXXXXXXXXXXXRTRDGSGEIEYSGGCKSATDSG-----------GRPPQSPAKACPVPVIRGWSASGSHGNAGGGEPPARGRSRGGHWAG--ASVGSMSW 357
            MVVLEAPFP    ++R  S   K  G+ +   A  + +N  A  ADN+FAHS LL VMRDP  S+LPRAVSEYMIGSMADFSAS   A +   A   GG V    D +AAS  P PK AP                       C   EAS           A +P P                                  S +             XXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXSQLPTL S T SPE SRS SF+ASEL GXXXXXX       TR+GSGE+ + G     T               R  QSP++A  VPV+RGWSA G     GGG P  RG SRGGH AG   S+GS+ W
Sbjct:  779 MVVLEAPFPTASAISRQASSAQKGSGIAAFSTANNATSNPHASSADNAFAHSALLAVMRDPAPSVLPRAVSEYMIGSMADFSASAGAAPTATTALAPGGGVSVSGDDLAASPSPLPKAAPAGG----------------EAAACPAGEAS-----------ATSPVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSGATTAHPAPPITDTPXXXXXXXXXXXXXXXXXXXXXTGAALWKVHPPLTXXXXXXXXXXXXSQLPTLRSLTVSPEASRSHSFSASELGGXXXXXX-------TREGSGEMAHGGVGDGGTTXXXXXXXXXXXXXSRSTQSPSRARLVPVMRGWSAGG----VGGGGPLLRGSSRGGHGAGEGGSMGSLGW 1132
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig832.17324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIM0_ECTSI8.450e-2143.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig832contigL-elsbetiae_contig832:18243..19651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig832.17324.1mRNA_L-elsbetiae_contig832.17324.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig832 18243..19651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig832.17324.1 ID=prot_L-elsbetiae_contig832.17324.1|Name=mRNA_L-elsbetiae_contig832.17324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=357bp
MVVLEAPFPKTVARHPSGGLKRRGLPSSDAAVASAANTGAADNSFAHSKL
LGVMRDPESSLLPRAVSEYMIGSMADFSASTAGASSGAAAPVSGGSVVDV
IDGVAASRLPPPKTAPVEAVLSSASDDVAAPPPPAATPGCVGDEASEYSH
SSLLATAAAAPTPGSANVRRGSSGSDNLLTRSISAPSSSGAATTAATTTI
HSTPPERLTSTASVPSSSSTGAALWTTHAASSLPAEADPPPPPSQLPTLS
STASPESRSQSFTASELNGGGGSGGGGGGGGRTRDGSGEIEYSGGCKSAT
DSGGRPPQSPAKACPVPVIRGWSASGSHGNAGGGEPPARGRSRGGHWAGA
SVGSMSW
back to top