prot_L-elsbetiae_contig8312.17318.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8312.17318.1
Unique Nameprot_L-elsbetiae_contig8312.17318.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length800
Homology
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BLAST of mRNA_L-elsbetiae_contig8312.17318.1 vs. uniprot
Match: A0A6H5JGG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG2_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.030e-7
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0 
Query:    4 RKEKCAHHLGCTKQPSFGVAGTKNPEFCSEHKKDGMMNVTSRRCNH 49
            R+  C    GCT +PS+G AG K  EFCS+HKK GMMN+ S+RC H
Sbjct:   22 RQRLCCQEDGCTTRPSYGNAGCKKAEFCSQHKKPGMMNLVSKRCGH 67
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BLAST of mRNA_L-elsbetiae_contig8312.17318.1 vs. uniprot
Match: A0A6H5KY67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY67_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.250e-6
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0 
Query:    7 KCAHHLGCTKQPSFGVAGTKNPEFCSEHKKDGMMNVTSRRCNH 49
            +C    GCT +PS+G+ G K  EFCS+H K GM+N+T +RC H
Sbjct:   25 RCCQEHGCTVRPSYGIDGCKKAEFCSKHSKPGMINLTKKRCGH 67
[Close]
BLAST of mRNA_L-elsbetiae_contig8312.17318.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.500e-6
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    4 RKEKCAHHLGCTKQPSFGVAGTKNPEFCSEHKKDGMMNVTSRRC 47
            R  +C H   CTK+P++GVAG+K  EFCS+H +DGM+NV ++RC
Sbjct:   60 RMSQCGHE-NCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 102
[Close]
BLAST of mRNA_L-elsbetiae_contig8312.17318.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.170e-6
Identity = 22/37 (59.46%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:   11 HLGCTKQPSFGVAGTKNPEFCSEHKKDGMMNVTSRRC 47
            H  CTK+P++GVAG+K  EFCS+H +DGM+NV ++RC
Sbjct:    6 HANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 42
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8312.17318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGG2_9PHAE2.030e-756.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY67_9PHAE1.250e-651.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT00_9PHAE3.500e-654.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI4.170e-659.46EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8312contigL-elsbetiae_contig8312:4301..7694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8312.17318.1mRNA_L-elsbetiae_contig8312.17318.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8312 3248..7829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8312.17318.1 ID=prot_L-elsbetiae_contig8312.17318.1|Name=mRNA_L-elsbetiae_contig8312.17318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=800bp
MTPRKEKCAHHLGCTKQPSFGVAGTKNPEFCSEHKKDGMMNVTSRRCNHN
ECTKWPSFGVAGGKKPEFCFGHKKDGMVNVVSRRCNHHGCTKQPSYAVPG
SRPEFCSAHRKDGMVDVVTRRCNHRDCTKYPVYGAACSRKPRFCPEHKKD
GMVYVMSKKLNHHDGWQASCDISGSKKPEFCSGHENDGMAEDVVTRRCSH
HDCTKHPVYGAAGSTKPEFCSGHKLDGMVDVVSRRCSHHGCTARPLYGVA
GSTKPEFCSGHQKDGMVDVVTRRCTHRGCTKQSRYGVADGEKPEFCSEHQ
DDEMADDANSRCAQHGCTTRPFYGVAGSKKPEFCSRHKEVGMVNIVNKRC
ANGDSAEQPSYDVAGHEKPELCAHHDCTKRPSHGVAGSKTAEFCPGHKKD
GMVNVVRRKCNHHGCTKQPSYGVPGSRPEFCAEHKRDGMVDAVTRRCNHS
DCTKQPSYGVPGSRPEFCSAHKKDGMVDVVTRRCNHRDCNKQPVFAPTDS
KKAEFCSGHKLDGMVAVGSKRCNHHDCIKQPVFAFAGSKKGEFCSGHKKD
GMVDVVNRKCAEPGCTKRPLFGFPGSKRPEFCSGHKKVGMMDVFNKRCAH
HGCIKRPSQGFAGGKKKVFCAEHAEESIAHHASNIQSSRDGRSGGAGCGY
GDSAAAGADDTARDTATGKRRRARSPSPTQAEASSGDRRAEDKRNTRRTS
TGLPVASISVEPGGDESRARQRYGGEDGNGSLRRYGRPRGSSQSPSGGRS
GTRDELIAPALMMMDLARYHTPRRVSRDSVLVAQRERWAGKPHRGEHQS*
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