prot_L-elsbetiae_contig8305.17308.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8305.17308.1
Unique Nameprot_L-elsbetiae_contig8305.17308.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length125
Homology
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BLAST of mRNA_L-elsbetiae_contig8305.17308.1 vs. uniprot
Match: A0A6H5K212_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K212_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.110e-18
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 0 
Query:    8 GKEPLMRSASSPPSISCFRGSAGDSGGRQPERPGRQNITPPRRHPLGLIGGLVEESHHPTVPSPVAHREEDAAAPAAEGCPGLCSSVGSDN 98
            GKEPL RSASSPPSI+C RG   +       RP RQN+TPP+RHP+GLI G++EES HP  PSP   ++ D+      G  GL  S G  N
Sbjct:  158 GKEPLKRSASSPPSINCARGPPNEDDATCSSRPDRQNVTPPQRHPVGLIDGIIEESRHPLAPSPAKDKDGDSVG---AGLLGLYHSAGRRN 245
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8305.17308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K212_9PHAE3.110e-1851.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8305contigL-elsbetiae_contig8305:2723..5329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8305.17308.1mRNA_L-elsbetiae_contig8305.17308.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8305 2723..5330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8305.17308.1 ID=prot_L-elsbetiae_contig8305.17308.1|Name=mRNA_L-elsbetiae_contig8305.17308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp
PLPAGRPGKEPLMRSASSPPSISCFRGSAGDSGGRQPERPGRQNITPPRR
HPLGLIGGLVEESHHPTVPSPVAHREEDAAAPAAEGCPGLCSSVGSDNNG
GDAVVADDSSGGSSGVNDGGVFRQD
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