prot_L-elsbetiae_contig8285.17293.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8285.17293.1
Unique Nameprot_L-elsbetiae_contig8285.17293.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length278
Homology
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BLAST of mRNA_L-elsbetiae_contig8285.17293.1 vs. uniprot
Match: A0A6H5JV62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV62_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.740e-48
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0 
Query:    1 MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFKRPGMFELPPFESFHKLTQLCHSCSPTVTLLVKAYKPHLEPLLS 91
            MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAF RPGMFELP FESFH +T+LCHSCSPTV+LLVKAY PHLEPLLS
Sbjct:  980 MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFLRPGMFELPGFESFHTITRLCHSCSPTVSLLVKAYMPHLEPLLS 1070
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BLAST of mRNA_L-elsbetiae_contig8285.17293.1 vs. uniprot
Match: D7FM09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM09_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.330e-24
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:    1 MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFKRPGM 52
            MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAF RPGM
Sbjct:  940 MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFLRPGM 991
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8285.17293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV62_9PHAE2.740e-4892.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM09_ECTSI1.330e-2498.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8285contigL-elsbetiae_contig8285:1314..4308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8285.17293.1mRNA_L-elsbetiae_contig8285.17293.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8285 234..8792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8285.17293.1 ID=prot_L-elsbetiae_contig8285.17293.1|Name=mRNA_L-elsbetiae_contig8285.17293.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp
MLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFKRP
GMFELPPFESFHKLTQLCHSCSPTVTLLVKAYKPHLEPLLSPPPPPPPPP
TVTSSSSGGGGGGGGGSGGSGNNHSGPGGGLAKHSSILPPLGFRQQQQQQ
QQQQQQQQSQQQQSQQQQDSAVPPQPAVSSGGGCGGGGGGGALRATASTS
SAGPGAPATSALSFSSPASMMSAHGRHQEAAGGSGSGGGGGWGWAGSGGH
GSSSNFGGLDDGGGDGGAVGHLPVGPH*
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