prot_L-elsbetiae_contig8281.17289.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8281.17289.1
Unique Nameprot_L-elsbetiae_contig8281.17289.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length417
Homology
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 2.620e-106
Identity = 200/353 (56.66%), Postives = 243/353 (68.84%), Query Frame = 0
Query:    1 MTLVSLLSLTFYGWEETAPAGHVGRGAIETAAAGGRGAGGLGSLCAKGSTWRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAYCVYYNYLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSLCGLVVAWFALHKLGR-GA--PKTREDSLD--AAEQGDVADGDPNGNPTILATPVEDNGSDGGDAGSAGREASARKAAAPVDATALLE-ALRPNGFGDE-DTDLDTSDP 346
            M+++ +LSL F+GWEETAPA   G G     A+ G   GG   LCA+GS+ RIV+PFSVLKVFLE+ +L +LA VL CF  +LN + VYYNY DFRYHWS LDIS FFSTFG+ LALTSG++IRFLVPKRLS+ RGV+LG+ LQ  S T FGLA +GWM Y VL+AT+LQYITEPCIQGVMA  V ADRQGSLQGAVQ LR ++ G+AGV YGQ+FSLGVS   E   GF+LPGLPLFC++G     L +AW+AL K G  GA  PK+  +  D  A E G +A    +   +  ATP ED+  DGG +G         K A   + TAL++ A R  G GDE DT  D S+P
Sbjct:  221 MSVLGVLSLKFFGWEETAPAATQGAGGATANASAG---GGWKKLCARGSSSRIVNPFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRKAGETGAADPKSTANPSDVEAEEDGMMASNTVDVTDSSTATPAEDSSGDGGRSG---------KEAPAANPTALMQPASRVTGLGDEEDTMSDMSEP 561          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 2.240e-49
Identity = 106/225 (47.11%), Postives = 142/225 (63.11%), Query Frame = 0
Query:   36 RGAGGLGSLCAKGSTWRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAYCVYYNYLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSLCGLVVAWFALHKLGR 260
            +GAGG G   A+ S  + ++P SVLKVFLE+R L  +A     F  +LN +   YNY+D+R+ W+  +IS+FF+T+ + +AL  G +IRF+VPKRL+ E+G + G+ +Q  S    GL  RGWMLYP L+   LQ ITEPC+Q +MAT V  + QGSLQGAV SLR++  GVA   + QVFS G S GFEE         P F +   SL  L VAW+ L KL +
Sbjct:  330 QGAGGRGR--ARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEA--------PFFLATAISLVSLAVAWWPLRKLDK 544          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: UPI001244F4FB (MFS transporter n=2 Tax=Staphylococcaceae TaxID=90964 RepID=UPI001244F4FB)

HSP 1 Score: 78.6 bits (192), Expect = 3.480e-12
Identity = 62/200 (31.00%), Postives = 93/200 (46.50%), Query Frame = 0
Query:   52 RIVDPFSVLKVFLENRMLTELAGVL----LCFCFALNAYCVYYNYLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRIL--------AAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFC 239
            R  +P S + V +  R +  L  V     L F   + ++ +Y N   FRY W A       +  G+  A+  G +++F V  R   ER V++G+    I  T +GLAP GWML+P++  TI  Y T P I  +++       QG   G++ S+R+L        A GV G+   QV  L  SD    T  F+   L + C
Sbjct:  204 RRANPLSSIMVLIRRRDIGFLIVVWILFQLAFAMMIESWVLYTN---FRYDWDANINGIALACVGIATAIAQGGLMKFFVD-RFGEERTVLIGLFTAAIGFTLYGLAPAGWMLFPIIFLTIPLYTTGPAILAIVSKATKPTEQGLTIGSLMSVRMLMVVIGPGIATGVLGIVAKQVGVLPQSDVRLGTVFFICASLSIIC 399          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: A0A7X8T9J3_9HYPH (TCR/Tet family MFS transporter n=2 Tax=unclassified Rhizobium TaxID=2613769 RepID=A0A7X8T9J3_9HYPH)

HSP 1 Score: 73.9 bits (180), Expect = 1.120e-10
Identity = 59/221 (26.70%), Postives = 100/221 (45.25%), Query Frame = 0
Query:   51 WRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAYCVYYNYLD-FRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSLCGLVVAWFALHKLGRGAPKTREDSL 270
            W+  +P   LK       +  +  V+  F  A + Y   ++++  +RY WS   I      +G+  AL  G+I+  +VP  L   R  ++G+    I  T +  A  GWM+Y V++ T+++ + +P ++ + A  V    QG LQGA+ SL  +   V  + + Q+F          TF     G P   +A F L   +V    L K+  G P    ++L
Sbjct:  201 WKRANPLGALKQMRNYPGIGWIGAVMFLFWLAHSVYPAVWSFVSTYRYGWSEGQIGLSLGIYGIGAALVMGLILPKIVPV-LGERRTAVVGLSFSVIGLTGYAFAWEGWMVYVVIIMTVMENLADPPLRSIAAGKVPPSAQGELQGALTSLTSITTIVGPLIFTQLFGYFTGPDAPVTF----AGAPYLLAAFFILSAALVF---LAKVRTGKPAEALEAL 413          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: UPI00048A4F30 (Tetracycline resistance MFS efflux pump n=4 Tax=Legionella pneumophila TaxID=446 RepID=UPI00048A4F30)

HSP 1 Score: 70.9 bits (172), Expect = 1.070e-9
Identity = 51/204 (25.00%), Postives = 97/204 (47.55%), Query Frame = 0
Query:   55 DPFSVLKVFLENRMLTELAGVLLCFCFALNAYCVYYN-YLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSLCGLVVAWFALHK 257
            +P  ++    +  ++ +L  +      A N + V +  Y   +++W+A ++ F  +  G+ +A   G + + ++  RL  +  + LG+L    S   FGLAP+ WM+YP++    L  I  P +Q +++ L+ ++ QG LQG + S   +AA +A + +  +F L        +F    PG     +A   L  L+  W    K
Sbjct:  197 NPLILIARSFKRPLIFKLMIIYFLLFLAANVHMVNWTLYTQTKFNWTAKEVGFSLTFVGLMIAFVQGFLSKTII-LRLGEKNSLTLGILAYCFSFFLFGLAPKSWMMYPIIALFSLSGIAIPALQSLLSRLIASNEQGELQGILVSFASVAAIIAPIIFSFLFILFTEPDGPASF----PGAAYEGAAAICLIALIFWWRIFFK 395          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: W6RB75_9HYPH (Tetracycline resistance protein, class A TetA(A) n=18 Tax=Rhizobium TaxID=379 RepID=W6RB75_9HYPH)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-8
Identity = 44/167 (26.35%), Postives = 80/167 (47.90%), Query Frame = 0
Query:   51 WRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAYCVYYNYLD-FRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVF 216
            W+  +P   LK       +  +  V+  F  A   Y   ++++  +RY WS   I      +G+  A   GVI+  +VP  L   +  +LG+    +  T +  A  GWM+Y V++ T+++ + +P ++ + A  V    QG LQGA+ SL  +   +  + + Q+F
Sbjct:  201 WKRANPLGALKQMRAYPGIGPICAVMFLFWLAHAVYPAVWSFVSTYRYGWSEGQIGLSLGIYGIGAAFVMGVILPKIVPV-LGEWKTAVLGLSFSVVGLTGYAFAWEGWMVYTVIVLTVMENVADPPLRSIAAGKVPPSAQGELQGALTSLSSITTIIGPLIFTQLF 366          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: A0A212PX24_RHOAC (MFS transporter, DHA1 family, tetracycline resistance protein n=2 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=A0A212PX24_RHOAC)

HSP 1 Score: 66.6 bits (161), Expect = 2.610e-8
Identity = 48/188 (25.53%), Postives = 80/188 (42.55%), Query Frame = 0
Query:   51 WRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAY-CVYYNYLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPL 237
            WR  +    LK       L  +   +     A  +  C++  Y DFRYHW+  +     +  GVT  + +G ++R  V KR       + G+L        F +AP GW     +    L  +  P +Q +    V    QG+LQGAV SLR ++  +  + + Q+ +  ++ G +    + L  L L
Sbjct:  202 WRSANVLGSLKFISREPGLALIVSAIFLSLLAHESLPCLFVIYTDFRYHWTPTETGLALAAVGVTQTIVAGGLVRQTV-KRFGETPSAVAGLLFGVAGFVGFAVAPVGWAFIASIPLIALWGLAAPAMQSMATRFVGVSEQGTLQGAVSSLRGVSGMIGPITFTQLLAFEIASGKQPGLAYGLSALLL 388          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: A0A2S6NDD1_9HYPH (Tetracycline resistance MFS efflux pump n=1 Tax=Rhodoblastus sphagnicola TaxID=333368 RepID=A0A2S6NDD1_9HYPH)

HSP 1 Score: 66.6 bits (161), Expect = 2.620e-8
Identity = 40/151 (26.49%), Postives = 71/151 (47.02%), Query Frame = 0
Query:   87 CVYYNYLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPL 237
            C++  Y DFRYHW+  +     +  G+T  + +G ++R  V K+       + G+L        F +AP GW     +    L  +  P +Q +    V+   QG+LQGAV SLR ++  +  + + Q+ +  ++ G +    + L  L L
Sbjct:  239 CLFVIYTDFRYHWTPTETGLALAAVGITQTIVAGGLVRQSV-KKFGETPSAVAGLLFGVAGFVGFAVAPAGWAFIAAIPLIALWGLAAPAMQSMATRFVNVSEQGTLQGAVSSLRGVSGMIGPITFTQLLAFEIASGKQPGLAYGLSALLL 388          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: A0A7W5SEK7_9HYPH (DHA1 family tetracycline resistance protein-like MFS transporter n=1 Tax=Rhizobium sp. BK602 TaxID=2586986 RepID=A0A7W5SEK7_9HYPH)

HSP 1 Score: 66.2 bits (160), Expect = 3.600e-8
Identity = 46/157 (29.30%), Postives = 74/157 (47.13%), Query Frame = 0
Query:   94 DFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSLCGLVV 250
             +RY WS   I F    +G+  A+T G+++  LVP  L   +  +LGM   GI    +  A  GWM+Y V++ T+++ + +  ++ + A  V    QG LQGA+ SL  + A +  V +  +F    +     TF     G P       +L  L V
Sbjct:  245 SYRYGWSEGQIGFSLGVYGIGAAITIGLVLPRLVPL-LGEWKTALLGMTFSGIGLMGYASAWHGWMVYAVIVVTVIENVADAPLRSIAAGKVPPSAQGELQGALGSLTSITAIIGPVLFPYLFRYFTAPEAPVTF----AGAPFIMGVILTLAALTV 396          
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Match: UPI001CD5C31A (TCR/Tet family MFS transporter n=1 Tax=Cognatishimia sp. MH4019 TaxID=2854030 RepID=UPI001CD5C31A)

HSP 1 Score: 65.9 bits (159), Expect = 4.610e-8
Identity = 52/196 (26.53%), Postives = 87/196 (44.39%), Query Frame = 0
Query:   51 WRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAY-CVYYNYLDFRYHWSALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATSFGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSLRILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSL 245
            W   +PF   +       +  L  ++  + FA   Y   +  +   R+ WS   +    ++FGV++A+  G IIR+++P R      V+ G L    + T   L   GW+       T L  +  P +QG+M+ +   D+QG LQG + S + +A  ++ +   QVF +     F    G  LPG P   +A   L
Sbjct:  202 WSRANPFGAFQALGRLPGVARLLLLVFLYEFAFIVYPATWAFFTQERFGWSPAMVGLSLASFGVSMAIVQGGIIRWIIP-RFGDRNTVIYGFLFNFFAFTVLMLLSSGWVALAFTPITALGAVVTPAVQGMMSRIASDDQQGELQGVIASSKAVAMILSPLVMTQVFWM-----FTSGDGLYLPGAPFGLAAALML 391          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8281.17289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH6_ECTSI2.620e-10656.66Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
D7FNH7_ECTSI2.240e-4947.11Tetracycline-efflux transporter n=1 Tax=Ectocarpus... [more]
UPI001244F4FB3.480e-1231.00MFS transporter n=2 Tax=Staphylococcaceae TaxID=90... [more]
A0A7X8T9J3_9HYPH1.120e-1026.70TCR/Tet family MFS transporter n=2 Tax=unclassifie... [more]
UPI00048A4F301.070e-925.00Tetracycline resistance MFS efflux pump n=4 Tax=Le... [more]
W6RB75_9HYPH1.130e-826.35Tetracycline resistance protein, class A TetA(A) n... [more]
A0A212PX24_RHOAC2.610e-825.53MFS transporter, DHA1 family, tetracycline resista... [more]
A0A2S6NDD1_9HYPH2.620e-826.49Tetracycline resistance MFS efflux pump n=1 Tax=Rh... [more]
A0A7W5SEK7_9HYPH3.600e-829.30DHA1 family tetracycline resistance protein-like M... [more]
UPI001CD5C31A4.610e-826.53TCR/Tet family MFS transporter n=1 Tax=Cognatishim... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..255
e-value: 1.2E-8
score: 36.0
NoneNo IPR availablePANTHERPTHR23507FAMILY NOT NAMEDcoord: 61..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..416
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 235..255
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 136..158
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 53..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8281contigL-elsbetiae_contig8281:3744..7563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8281.17289.1mRNA_L-elsbetiae_contig8281.17289.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8281 2685..8620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8281.17289.1 ID=prot_L-elsbetiae_contig8281.17289.1|Name=mRNA_L-elsbetiae_contig8281.17289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp
MTLVSLLSLTFYGWEETAPAGHVGRGAIETAAAGGRGAGGLGSLCAKGST
WRIVDPFSVLKVFLENRMLTELAGVLLCFCFALNAYCVYYNYLDFRYHWS
ALDISFFFSTFGVTLALTSGVIIRFLVPKRLSMERGVMLGMLLQGISATS
FGLAPRGWMLYPVLLATILQYITEPCIQGVMATLVDADRQGSLQGAVQSL
RILAAGVAGVGYGQVFSLGVSDGFEETFGFLLPGLPLFCSAGFSLCGLVV
AWFALHKLGRGAPKTREDSLDAAEQGDVADGDPNGNPTILATPVEDNGSD
GGDAGSAGREASARKAAAPVDATALLEALRPNGFGDEDTDLDTSDPGGVL
SATALFEALRPNGFGDEGAGLDTSDPGGVLLTGLGDEEGAAVSDMSMPLL
PRGSDAQNESHRSSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf