prot_L-elsbetiae_contig8277.17280.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8277.17280.1
Unique Nameprot_L-elsbetiae_contig8277.17280.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length268
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8277.17280.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.440e-31
Identity = 106/273 (38.83%), Postives = 130/273 (47.62%), Query Frame = 0 
Query:   18 KDRVALF-SGSKKIAGQDIDGRDGAGGDEAPARRPSLGLHISSNXXXXXXSGR-PQARETSPRKEVPVPAQGVEVSPLPPAPLSYAAVARRASFPGIAEEDSPTAGGVSGGD-------GSAPRGEPAA----PEKSGLSQQEVGVRPXXXXXXXXXXXXXXXX---------SSGAESFSVGDSASLCGRHSRRESSRSLDDYLYEPVVVPLSRVDWSHQPVLRLSDCDLPQPREWTLADIGKEIEEDLGEALRAQTDGSANAGLGHGAYSL 268
            K++V  F SGS+K   +             P  RPSL L +SSN           QA +   R   PV ++  +++  P                    ED+P+ GG +G          +AP  EPAA    P  +   ++E  V P                         SSG  S SV D A   GR      +   D+  YEPV+ PLS VDWSH+P+  L D DLPQPREWTLADIGKEI EDLGEALRAQT+GSANAGLGHGAYSL
Sbjct: 1416 KNKVRTFTSGSRKRWHEGSGXXXXXDDSSTPPLRPSLALRVSSNTAIDEFDAAVSQAGKKLSRAWPPVRSKATDLTTPPXXXXXX--------XXXXXXEDAPSLGGPAGAGTTAGASKDAAPTVEPAATATRPAAAEAIEEEEAVEPDAVAAGPSRRESGAPPNPSVGSGKRSSGGGSVSVEDGAPAHGRQESSSEAFDDDEGYYEPVLAPLSLVDWSHEPLFALGDWDLPQPREWTLADIGKEIAEDLGEALRAQTEGSANAGLGHGAYSL 1680
[Close]
BLAST of mRNA_L-elsbetiae_contig8277.17280.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.930e-29
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0 
Query:  193 SRSLDDY--LYEPVVVPLSRVDWSHQPVLRLSDCDLPQPREWTLADIGKEIEEDLGEALRAQTDGSANAGLGHGAYSL 268
            S   DDY   YEPV+ PLS VDWS++P+L L DCDLPQPREWTLADIGKEI EDLGE+LRAQT+GSANAGLGHGAYSL
Sbjct: 1654 SEDYDDYEGYYEPVLAPLSLVDWSYEPLLALGDCDLPQPREWTLADIGKEIAEDLGESLRAQTEGSANAGLGHGAYSL 1731
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8277.17280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB83_ECTSI1.440e-3138.83WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KB05_9PHAE1.930e-2978.21UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8277contigL-elsbetiae_contig8277:1943..4713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8277.17280.1mRNA_L-elsbetiae_contig8277.17280.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8277 1941..4713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8277.17280.1 ID=prot_L-elsbetiae_contig8277.17280.1|Name=mRNA_L-elsbetiae_contig8277.17280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp
GGGGGGGGGGGGFGSSVKDRVALFSGSKKIAGQDIDGRDGAGGDEAPARR
PSLGLHISSNNNDDDDSGRPQARETSPRKEVPVPAQGVEVSPLPPAPLSY
AAVARRASFPGIAEEDSPTAGGVSGGDGSAPRGEPAAPEKSGLSQQEVGV
RPPPPPPPPPSSAVPRRRSSGAESFSVGDSASLCGRHSRRESSRSLDDYL
YEPVVVPLSRVDWSHQPVLRLSDCDLPQPREWTLADIGKEIEEDLGEALR
AQTDGSANAGLGHGAYSL
back to top