prot_L-elsbetiae_contig8271.17275.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8271.17275.1
Unique Nameprot_L-elsbetiae_contig8271.17275.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
BLAST of mRNA_L-elsbetiae_contig8271.17275.1 vs. uniprot
Match: D7FHP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP8_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 9.790e-48
Identity = 88/131 (67.18%), Postives = 113/131 (86.26%), Query Frame = 0
Query:   43 VFHIAATESTIKGMVAQHKETLRSKAEEFKYSTAADRREAQQLEEKCAELQRVVTSADVVEREHAVITARLAALRVEDKEEEKSKTREMDALKRNLFNVRNDLENVFRTTLHNLNVAYEDQAFDAMVEEAM 173
            +FHIA+TESTIK M  +H+E L+++ E+F Y+TA +RRE  Q EEKCA+LQR++ S+DVVERE  V+ ARLAALRV+D++EE +  REMD LKRNLFNVRNDLENVFRTTLH+LN++Y++QAFDAMVEEA+
Sbjct:    1 MFHIASTESTIKSMTTEHEELLKNREEDFMYATAPERREVHQYEEKCADLQRILMSSDVVEREQKVLQARLAALRVDDEKEEVANAREMDGLKRNLFNVRNDLENVFRTTLHDLNMSYQEQAFDAMVEEAI 131          
BLAST of mRNA_L-elsbetiae_contig8271.17275.1 vs. uniprot
Match: A0A6H5K7R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R3_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.710e-22
Identity = 54/71 (76.06%), Postives = 64/71 (90.14%), Query Frame = 0
Query:  103 EREHAVITARLAALRVEDKEEEKSKTREMDALKRNLFNVRNDLENVFRTTLHNLNVAYEDQAFDAMVEEAM 173
            ERE  V+ ARLAALR++D+ EE +  REMDALKRNLFNVRNDLENVFRTTLH+LNV+Y++QAFDAMVEEA+
Sbjct:    9 EREQKVLQARLAALRMDDEMEEVANAREMDALKRNLFNVRNDLENVFRTTLHDLNVSYQEQAFDAMVEEAI 79          
BLAST of mRNA_L-elsbetiae_contig8271.17275.1 vs. uniprot
Match: A0A836CJ66_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ66_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.060e-13
Identity = 50/167 (29.94%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    6 MGEADKHAIRRKIEEKQVLIREQRKVRERLSRECADTVFHIAATESTIKGMVAQHKETLRSKAEEFKYSTAADRREAQQLEEKCAELQRVVTSADVVEREHAVITARLAALRVEDKEEEKSKTREMDALKRNLFNVRNDLENVFRTTLHNLNVAYEDQAFDAMVEEA 172
            M +A    +RR + +K+ ++ E+ KVRERLSR+ A+T+  I+  E+ I+ + A H  ++ ++    +   +   +E   + ++   L+R V + D+V++EHA + ARL +L+  + +E +    E++ LK ++F +R  L+ VFR TL  +    +D A   +++EA
Sbjct:   12 MVDAKNEELRRMLLDKKAMLAEEHKVRERLSRDHANTIHQISNIETAIRRLRADHLASVEAQQAASRAELSVLEQEVAAMNKQRLALERYVVTFDIVDQEHATLKARLRSLKESEGKEAQENAAELEGLKSSVFQLRTRLDEVFRKTLAAVQGQTKDSAMVEVLQEA 178          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8271.17275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHP8_ECTSI9.790e-4867.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7R3_9PHAE1.710e-2276.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJ66_9STRA3.060e-1329.94SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableCOILSCoilCoilcoord: 75..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8271contigL-elsbetiae_contig8271:2839..8860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8271.17275.1mRNA_L-elsbetiae_contig8271.17275.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8271 2839..8860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8271.17275.1 ID=prot_L-elsbetiae_contig8271.17275.1|Name=mRNA_L-elsbetiae_contig8271.17275.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
MKKGQMGEADKHAIRRKIEEKQVLIREQRKVRERLSRECADTVFHIAATE
STIKGMVAQHKETLRSKAEEFKYSTAADRREAQQLEEKCAELQRVVTSAD
VVEREHAVITARLAALRVEDKEEEKSKTREMDALKRNLFNVRNDLENVFR
TTLHNLNVAYEDQAFDAMVEEAMT*
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