prot_L-elsbetiae_contig8252.17255.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8252.17255.1
Unique Nameprot_L-elsbetiae_contig8252.17255.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length608
Homology
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BLAST of mRNA_L-elsbetiae_contig8252.17255.1 vs. uniprot
Match: D8LT10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT10_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 2.560e-126
Identity = 329/486 (67.70%), Postives = 350/486 (72.02%), Query Frame = 0 
Query:  126 SVVARREAKLKELKSLRKRKKAAVAAGEALAEEVEKNRMEQDEIAIQIDAANRLLALYDSNSSSPDVSILPSXXXXXXXXXXXXFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKGSVGGVESXXXXXXXXXXXYPLGGGREELAGGVGGEGFGLITSMPPPPVXXXXXXXXXXXXXSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREAAETVTVDAVDDFPARASSDRSGXXXXXXXXXXXXEVAAEESGRRGGGSXXXXXXXXXXXXVG----GVHRGVEVNGGSFNIVKQLMFKTSRSRRPRGMAFNPMVPGLFAVCSADLSVDLWRYGRNNQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLMDNWAATVIGKDGKKSGDMKLRSDRHNKPASAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVA 607
            SV  RR+AKLKELK L  R+KAAVAAGEALA+EVEKNRMEQDEIAIQ DAA RLLALYDSNS +PDV+ILPSXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXX                                 GS   + +           YPLG  R  L GGVGGEGFGLITSMPP                + GG XXXXXXXXXXXXXXXXXXXXXXXXXXX     S        VDA D+FPAR  SD +G               A +SG      XXXXXXXXXXXX      GVHRGVEVN  SFNIVKQLMF+TSRSR+PR MAFNP+ PGLFAVCSADLSVDLWRYGRN QELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTL++NWAAT+I KDG++  DMKLRSDRH+KPA AVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDA+SDLHKVA
Sbjct:  185 SVSDRRQAKLKELKVLDGRRKAAVAAGEALAKEVEKNRMEQDEIAIQFDAAKRLLALYDSNSDTPDVAILPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAARGSRV-----------------------SGSSPSLSAPAARSNGKD--YPLGSTRVGLPGGVGGEGFGLITSMPP----------------AGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPPAS--------VDAADEFPARVPSDGAGAGAGE---------GALDSGXXXXXXXXXXXXXXXXXXXSRETTGVHRGVEVNRDSFNIVKQLMFQTSRSRKPRTMAFNPVDPGLFAVCSADLSVDLWRYGRNKQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLVNNWAATIIAKDGRRKSDMKLRSDRHHKPAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVA 612
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BLAST of mRNA_L-elsbetiae_contig8252.17255.1 vs. uniprot
Match: A0A6H5KKY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY4_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 7.500e-121
Identity = 372/487 (76.39%), Postives = 390/487 (80.08%), Query Frame = 0 
Query:  126 SVVARREAKLKELKSLRKRKKAAVAAGEALAEEVEKNRMEQDEIAIQIDAANRLLALYDSNSSSPDVSILPSXXXXXXXXXXXXFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKGSVGGVESXXXXXXXXXXX----YPLGGGREELAGGVGGEGFGLITSMPPPPVXXXXXXXXXXXXXSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREAAETVTVDAVDDFPARASSDRSGXXXXXXXXXXXXEVAAEESGRRGGGSXXXXXXXXXXXXVGGVHRGVEVNGGSFNIVKQLMFKTSRSRRPRGMAFNPMVPGLFAVCSADLSVDLWRYGRNNQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLMDNWAATVIGKDGKKSGDMKLRSDRHNKPASAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVAV 608
            SV  RR+AKLKELK L  R+KAAVAAGEALA+EVEKNRMEQDEIAIQIDAA RLLALYDSNS +PDV+ILPSXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXX    YPLG  R  L GGVGGEGFGLITSMPP                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR+     +VDA D+FPAR  SD +G XXXXX    XX               XXXXXXXX     GVHRGVEV   SFNIVKQLMF+TSRSR+PR MAFNP+ PGLFAVCSADLSVDLWRYGRN QELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTL++NWAAT+I KDG+   DMKLRSDRHNKPA AVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDA+SDLHKVA+
Sbjct:  313 SVSDRRQAKLKELKVLDGRRKAAVAAGEALAKEVEKNRMEQDEIAIQIDAAKRLLALYDSNSDTPDVTILPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYPLGSTRVGLPGGVGGEGFGLITSMPP--------------------AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKPP--ASVDAADEFPARVPSDGAGAXXXXXALDSXXXXXXXXXXXX-----XXXXXXXXSRETTGVHRGVEVKRDSFNIVKQLMFQTSRSRKPRTMAFNPVDPGLFAVCSADLSVDLWRYGRNKQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLVNNWAATIIAKDGRSKSDMKLRSDRHNKPAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVAI 772
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8252.17255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT10_ECTSI2.560e-12667.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKY4_9PHAE7.500e-12176.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 443..607
e-value: 9.3E-12
score: 46.7
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 463..594

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8252contigL-elsbetiae_contig8252:437..6220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8252.17255.1mRNA_L-elsbetiae_contig8252.17255.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8252 437..6220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8252.17255.1 ID=prot_L-elsbetiae_contig8252.17255.1|Name=mRNA_L-elsbetiae_contig8252.17255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=608bp
PPPPPPPPETPPTESPAGSRNNKRAAPASPATPQQSGHGDDGGGRRRRRQ
SDSRGADETGGGGGGSGSGSVAGGNGDEAGGDSGRGAGKSLKRARGNGKA
RKSRQSEGGDASAAAEGEPRNPSKKSVVARREAKLKELKSLRKRKKAAVA
AGEALAEEVEKNRMEQDEIAIQIDAANRLLALYDSNSSSPDVSILPSPPP
PPAPPSPPLFGAAAAPSRSTSSSGTARGRGGSAAAAAASRGGRGSGSSRS
PLDAAGAGGGSGSSNRNRASGKGSVGGVESSSSSSSDDEDEYPLGGGREE
LAGGVGGEGFGLITSMPPPPVGGEGFGLITSMPPSSGGGGGGSGKNNSGG
SSSSSGGGGGGGGGGGSGSGSSREAAETVTVDAVDDFPARASSDRSGAGA
GAAAGVGEGEVAAEESGRRGGGSGGSGGSGGGGRGVGGVHRGVEVNGGSF
NIVKQLMFKTSRSRRPRGMAFNPMVPGLFAVCSADLSVDLWRYGRNNQEL
EKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLMDNWAATVIGKDGKK
SGDMKLRSDRHNKPASAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAK
SDLHKVAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf