prot_L-elsbetiae_contig8209.17212.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8209.17212.1
Unique Nameprot_L-elsbetiae_contig8209.17212.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length641
Homology
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A6H5L8S9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8S9_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 4.610e-138
Identity = 259/488 (53.07%), Postives = 306/488 (62.70%), Query Frame = 0
Query:  212 NPPEEVMRALAGSHNTIALLLLLLLHFVVTHIMSLACVVLGSAAIIGLDRRLRSHADAQVLKNRFVLLGVAVTAVLFVVLSAAVLNKFPEGDHLLFGLILMKPKPD-VSTVYAVIRTTIVVDLWARLISITIKAALAVVSVPG--SSGGTDS-----------------------SNHAAGLCSRGRLTACGH-RVRGSLRVGGGVEGGARFRES----PLPRGGRSSTFNADDVHSDGNSDRRGGGGDGA--GSGTRRAWRVCLCCSERFFGGPYRF--------------WRQSASGGDGNDAWETGGRDGSR------------AGGTGILLSRAGRQRRVNAIVEMAFMLYRCLLPVPVWLEFYGKESDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQVL 640
            NPPEE++RAL G+  TIALL+LL+ H++VTH++ +A   +G+A ++ LD+RL SHA AQ L+NRFVLLGVAVTAV+ V LSA VL+ FP+G+ LL  L+L+ PKP  + TV AVIRTTIVVD+WARL+S+T+KA LAVVSVP   SSG   +                       S H  GL +R R  A    R R S+R GG  EG           P PR                               SG RRAWR  LCCS+ F GGPYRF               R SASGG G +                         GT   LSR  R RRVNA+VEMAF+LYRCLLP P+WLEFYGK+SDY   +YL+LKGM+VSFR DR VRA CYVRRG+LDRGK ATPEEV+E GSPDCSICYD+M RPL+LPC HLFCG CVAEWLERERTCPLCR EVP+SNPIPR+LRDGRT +VPQ+L
Sbjct:  285 NPPEELLRALVGARITIALLVLLMCHYIVTHLVGIAAFSMGTAIVVVLDQRLWSHAGAQTLRNRFVLLGVAVTAVVVVALSAMVLSNFPQGEGLLRRLLLVAPKPPALGTVSAVIRTTIVVDIWARLLSVTVKAVLAVVSVPDRDSSGNGSTXXXXXXXXXXXXXXXXXXXXXRVSRHGTGLFARMRSAALYRFRRRFSIRAGGRTEGSGXXXXXXXXXPHPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSSGARRAWRRWLCCSDWFCGGPYRFEGRGRYHVVGGQNDGRHSASGGAGVEXXXXXXXXAGXXXXXXXXXXXXXGAGTVAFLSRTARLRRVNAVVEMAFVLYRCLLPAPIWLEFYGKDSDYLAGIYLLLKGMQVSFRVDRFVRAACYVRRGELDRGKLATPEEVAEAGSPDCSICYDRMSRPLLLPCNHLFCGECVAEWLERERTCPLCRAEVPSSNPIPRSLRDGRTTVVPQIL 772          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: D7FJ26_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ26_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 2.290e-82
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 0
Query:  486 LLSRAGRQRRVNAIVEMAFMLYRCLLPVPVWLEFYGKESDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQVL 640
            L S +G QRRVNA+VEMAF+LYRCLLP PVWLEFYGK+SDYF  +YLVLKGM+VSFR DR VRA CYVRRG+LDRGK ATPEEV+E GSPDCSICYD+M RPL+LPC HLFCG CVAEWLERERTCPLCR EVP+SNPIPR+LRDGRT +VPQ+L
Sbjct:  357 LWSHSGAQRRVNAVVEMAFVLYRCLLPAPVWLEFYGKDSDYFAGIYLVLKGMQVSFRADRFVRAACYVRRGELDRGKLATPEEVAEAGSPDCSICYDRMSRPLLLPCNHLFCGECVAEWLERERTCPLCRAEVPSSNPIPRSLRDGRTTVVPQIL 511          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A7S2XZV9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.560e-40
Identity = 69/148 (46.62%), Postives = 98/148 (66.22%), Query Frame = 0
Query:  495 RVNAIVEMAFMLYRCLLPVPVWLEFY--GKESDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQVL 640
            ++ A++EM  ++YR LLPV VW ++Y    +   F   Y+++KG+ VS R   LV       RG L+ G F TP+ ++E GSP CSIC++ M  P++L C+H++C +C+ EWLERE TCP CR +V +SN IP A RDGRT I PQ+L
Sbjct:    1 KLYALMEMTSVVYRSLLPVAVWFQYYQVNSQGQMFATFYIIMKGLLVSRRLQALVEGAMQFIRGGLEHGTFVTPDGLAEAGSPACSICFEPMSHPVMLHCRHMYCETCIEEWLERESTCPNCRSQVSSSNSIPVAFRDGRTMIFPQLL 148          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A7S3XZP7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZP7_HETAK)

HSP 1 Score: 145 bits (367), Expect = 3.960e-37
Identity = 67/162 (41.36%), Postives = 99/162 (61.11%), Query Frame = 0
Query:  481 GGTGILLSRAGRQRRVNAIVEMAFMLYRCLLPVPVWLEFY---GKESDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQV 639
            G T    +    +R+V  ++E+AF++YR  LPVPVWL++Y   G   D F  LY  +K   +  R    +  L   R+G+L+ G +AT E ++E G PDCSIC++ + +P+ L C HLFC +CV +WL++E+TCP+CR  V  +N IP   RDG T  VP +
Sbjct:    4 GATASSATARSERRKVMGLMELAFLVYRTALPVPVWLQWYTCGGTAPDVFGVLYFFIKNFLIIHRFRVFLAGLSSYRKGELEYGAYATAETLAEAGHPDCSICFEALTKPVQLTCTHLFCEACVGQWLDKEQTCPVCRAAVSRANAIPARYRDGHTPWVPMI 165          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A7S2S9Z2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Z2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.290e-32
Identity = 68/152 (44.74%), Postives = 94/152 (61.84%), Query Frame = 0
Query:  493 QRRVNAIVEMAFMLYRCLLPVPVWLEFYGKESD--YFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIP--RALRDGRTAIVPQVL 640
            ++R+  ++E+   LYR LLP+P+W  +Y  + D   F  +YL LK M  S     L   +      DL+ G+ A+ +EV+E G PDC ICYD+MV P++LPC HLFC  CV EWLERE+TCPLCR + PTS  +   R    G T+++P VL
Sbjct:  275 KKRIYVLLELLSKLYRILLPIPMWFAYYESQDDNQVFLGVYLCLKAMVASSYLKVLFLMVKASLTTDLEIGRLASSQEVAEAGHPDCPICYDEMVSPVLLPCGHLFCEECVLEWLEREKTCPLCRADTPTSPLLASSRGNSSGSTSLLPHVL 426          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A835ZGZ2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGZ2_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.190e-26
Identity = 74/212 (34.91%), Postives = 104/212 (49.06%), Query Frame = 0
Query:  492 RQRRVNAIVEMAFMLYRCLLPVPVWLE----------------------------------FYGKES--DYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAE----------------------------WLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQV 639
            ++R+V A +E+  +L+R ++PVPVW                                    FY  ++  +YF A YL+ KG+ ++ R   L RAL  V R  L+ G++ T EE    G  DCSICY+ M +P+ LPC H+FC  C+AE                            WLERERTCPLCR E  T++P+P A RDGRT+++P V
Sbjct:  398 KKRKVFAALEILSLLHRTMMPVPVWYRTRLVTLTAQRAPLSPCARSPFPPSLRATRSRRGSFYMVDAGGEYFAAAYLLFKGLVLASRARMLARALRSVFRSGLEHGRYCTGEEAQAAG--DCSICYEAMTQPVKLPCDHMFCEVCLAESLSSCYVCFRLQFANPVLHVSFASRDSEWLERERTCPLCRAETTTTDPLPTAFRDGRTSLLPVV 607          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A8B8N9E6_9MYRT (RING finger and transmembrane domain-containing protein 2-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8N9E6_9MYRT)

HSP 1 Score: 113 bits (282), Expect = 2.370e-25
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0
Query:  492 RQRRVNAIVEMAFMLYRCLLPVPVWLEFY-GKE-----SDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQV 639
            +Q ++  +VE   +LYR LLP PVW  F+  KE     S   T LYL  K   V  +      AL  + R D+  G +AT E+V+  G   C+IC ++M  P++L CKH+FC  CV+EW ERERTCPLCR  V  ++   R+  DG T++  Q+
Sbjct:   21 KQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQFFFTALKALSRKDIHYGAYATAEQVNAAGDL-CAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADL--RSFGDGSTSLFFQI 171          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A067FWJ5_CITSI (RING-type domain-containing protein n=5 Tax=Citrus TaxID=2706 RepID=A0A067FWJ5_CITSI)

HSP 1 Score: 117 bits (294), Expect = 1.160e-24
Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 0
Query:  492 RQRRVNAIVEMAFMLYRCLLPVPVWLEFYGKE------SDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQV 639
            RQ ++  +VE A +LYR LLP PVW  F+  +      S   T LYL  K   V  +   L  A+  + R ++  G +AT E+V+  G   C+IC ++M  P++L CKHLFC  CV+EWLERERTCPLCR  V  ++   R+  DG T+++ Q+
Sbjct:  280 RQGQILTLVEYALLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTTVVDKVQSLFAAIRALSRKEVHYGSYATTEQVNAAGDL-CAICQEKMHAPILLQCKHLFCEDCVSEWLERERTCPLCRALVKPADL--RSFGDGSTSLLFQL 430          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A5B7A417_DAVIN (Putative RING finger and transmembrane domain-containing protein 2-like n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7A417_DAVIN)

HSP 1 Score: 112 bits (280), Expect = 3.310e-24
Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 0
Query:  492 RQRRVNAIVEMAFMLYRCLLPVPVWLEFYGKE------SDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAI 635
            RQ ++  +VE   +LYR LLP PVW  F+  +      S   T LYL  K   V  +    V AL  + R ++  G +AT E+V+  G   C+IC ++M  P++L CKH+FC  CV+EW ERERTCPLCR  +  ++   R+  DG T++
Sbjct:  100 RQGQMLTLVEYTLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVDKVRSFVAALKALSRKEVHYGSYATSEQVNSAGDL-CAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALIRPADL--RSFGDGSTSL 246          
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Match: A0A178UJ98_ARATH (RING-type domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178UJ98_ARATH)

HSP 1 Score: 108 bits (271), Expect = 4.190e-24
Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 0
Query:  493 QRRVNAIVEMAFMLYRCLLPVPVWLEFYGKE------SDYFTALYLVLKGMEVSFRTDRLVRALCYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSCVAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQV 639
            Q ++  +VE   +LYR LLP PVW  F+  +      S   T LYL  K   V  +      AL  + R ++  G +AT E+V+  G   C+IC ++M  P++L CKH+FC  CV+EW ERERTCPLCR  V  ++   ++  DG T++  Q+
Sbjct:    2 QGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGDL-CAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADL--KSFGDGSTSLFFQI 151          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8209.17212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8S9_9PHAE4.610e-13853.07RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FJ26_ECTSI2.290e-8280.65RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2XZV9_9STRA2.560e-4046.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XZP7_HETAK3.960e-3741.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S9Z2_9STRA3.290e-3244.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZGZ2_9STRA1.190e-2634.91RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8B8N9E6_9MYRT2.370e-2540.91RING finger and transmembrane domain-containing pr... [more]
A0A067FWJ5_CITSI1.160e-2441.56RING-type domain-containing protein n=5 Tax=Citrus... [more]
A0A5B7A417_DAVIN3.310e-2440.00Putative RING finger and transmembrane domain-cont... [more]
A0A178UJ98_ARATH4.190e-2438.56RING-type domain-containing protein n=1 Tax=Arabid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 577..614
e-value: 4.1E-8
score: 43.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 577..615
score: 13.67
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 563..634
e-value: 1.4E-17
score: 65.5
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 576..619
e-value: 1.2E-10
score: 41.1
NoneNo IPR availablePANTHERPTHR15860UNCHARACTERIZED RING FINGER-CONTAINING PROTEINcoord: 153..638
NoneNo IPR availablePANTHERPTHR15860:SF0LP20373Pcoord: 153..638
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 257..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..296
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 297..640
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..256
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 568..621
NoneNo IPR availableTMHMMTMhelixcoord: 277..296
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 592..601

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8209contigL-elsbetiae_contig8209:2152..7734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8209.17212.1mRNA_L-elsbetiae_contig8209.17212.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8209 1478..7737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8209.17212.1 ID=prot_L-elsbetiae_contig8209.17212.1|Name=mRNA_L-elsbetiae_contig8209.17212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=641bp
MHPDRANPMELEEHWRPDGDEADERGAVAPLLPHPAATGGAAGAGPAAVA
QSDTLSAAGARASWRREVVAPAMVAAARVSARLVSSSGPVAAQHARRGLR
LGLNGGGLPRLPGGSGAAATAAAATTAAAREQRRSVRRSRNEPGGDLEEG
TEEEDHPLALAAHGSPGLGFGEGVAGAAASMVEADNVGGDLSSQGSSESE
GDYSVNPMAVTNPPEEVMRALAGSHNTIALLLLLLLHFVVTHIMSLACVV
LGSAAIIGLDRRLRSHADAQVLKNRFVLLGVAVTAVLFVVLSAAVLNKFP
EGDHLLFGLILMKPKPDVSTVYAVIRTTIVVDLWARLISITIKAALAVVS
VPGSSGGTDSSNHAAGLCSRGRLTACGHRVRGSLRVGGGVEGGARFRESP
LPRGGRSSTFNADDVHSDGNSDRRGGGGDGAGSGTRRAWRVCLCCSERFF
GGPYRFWRQSASGGDGNDAWETGGRDGSRAGGTGILLSRAGRQRRVNAIV
EMAFMLYRCLLPVPVWLEFYGKESDYFTALYLVLKGMEVSFRTDRLVRAL
CYVRRGDLDRGKFATPEEVSEVGSPDCSICYDQMVRPLILPCKHLFCGSC
VAEWLERERTCPLCRHEVPTSNPIPRALRDGRTAIVPQVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS