prot_L-elsbetiae_contig8173.17168.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8173.17168.1
Unique Nameprot_L-elsbetiae_contig8173.17168.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length589
Homology
BLAST of mRNA_L-elsbetiae_contig8173.17168.1 vs. uniprot
Match: A0A6H5KMY2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY2_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 1.050e-151
Identity = 361/610 (59.18%), Postives = 405/610 (66.39%), Query Frame = 0
Query:    1 MDLGTILKKIEGGAYPSFGDFDRDLRLMWKNCRTYNAADTPPHKEALRQEEQWSKASAKIEESLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRTGSGGGAXXXXAPLAPMAPATQLDRHGLGRRVGLASILLSEPFVAKLMYRHASDRVPEACGERGMLPRDHPVFAPLLQLLNLGDYARPMFRAGTFGVRSVDDGLTRTVLPCVVALHARAEGAVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDWKAWYKDFPVVRRMVCTMLCRALVRGCDEAAAMLTPAATVAARRMADQRWLWATLGELLQKSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVLKPETLMLILRLFSIGLESAAVSDAVFFKALDLVANLLPLASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVILPRSALEDVVNQAAIRATRPTRRPRTEAEEEQIKEAFARVFARSPPAWADKLSEYRAKHAEKLSKKA--------------------PEAAG--SKPISIKGPKREREEAGGGGVGGEGARSSDAARKRKSRRVDV 588
            MDLGTILKKI+GG YPSFGDFDRDL+LMW+NCRTYN   T  +KEALRQEE+WSK SAKIE  LR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXX  LAPMA ATQL+R G+GRRVGLAS+LL+EPF AKLMYRHAS+R+PEAC ERG+LPRDHPV+APL+QLL+LG+ AR M RA TFGVR V   +TR VLPCVVALHARA       XXXXXXXXXXXXXXXXXXXXXXX             QDW+ WY D P +RR+VCTMLCRA+VRG DEAAA+L PAA  A +RMADQRWLWA+LGEL Q+SADA                                    P VLKPETL+L+L LFS GLE A V+DAVF KAL+LVA LLPLASP XXXXXXXXXXXXXX                                          +LPRSALEDVVNQAA RA RP RRP ++AEE + KEAFA+V A+SPP WA+K+SEYRAK AEK  K                         AG  S+PISIKGPKR R+EAGGGG   EG   +D+  ++KSRRV+V
Sbjct:   27 MDLGTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTQYNKEALRQEEEWSKISAKIENDLRHQEARPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEACCERGILPRDHPVYAPLVQLLDLGESARHMLRANTFGVREVKAEVTRAVLPCVVALHARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG-----------QDWRGWYSDVPAIRRLVCTMLCRAMVRGSDEAAAVLMPAAKAAVKRMADQRWLWASLGELAQRSADASAATAAAAAPVNEGGGVVAAGVAGKKCGKEKGTM--PRVLKPETLLLVLELFSTGLELALVTDAVFIKALELVAGLLPLASPXXXXXXXXXXXXXXXGGDKSKPKPSAPGKGAV-----------------------TALLPRSALEDVVNQAAARAARPPRRPLSQAEELRAKEAFAKVLAKSPPGWANKVSEYRAKLAEKSRKGGGGKVVGDGGGXXXXXXXXXXXXXAGRPSRPISIKGPKRGRQEAGGGGD--EGVDDTDS--RKKSRRVNV 596          
BLAST of mRNA_L-elsbetiae_contig8173.17168.1 vs. uniprot
Match: D7FZE7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE7_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 8.670e-148
Identity = 371/611 (60.72%), Postives = 413/611 (67.59%), Query Frame = 0
Query:    1 MDLGTILKKIEGGAYPSFGDFDRDLRLMWKNCRTYNAADTPPHKEALRQEEQWSKASAKIEESLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRTGSGGGAXXXXAPLAPMAPATQLDRHGLGRRVGLASILLSEPFVAKLMYRHASDRVPEACGERGMLPRDHPVFAPLLQLLNLGDYARPMFRAGTFGVRSVDDGLTRTVLPCVVALHARAEGAVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDWKAWYKDFPVVRRMVCTMLCRALVRGCDEAAAMLTPAATVAARRMADQRWLWATLGELLQKSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVLKPETLMLILRLFSIGLESAAVSDAVFFKALDLVANLLPLASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVILPRSALEDVVNQAAIRATRPTRRPRTEAEEEQIKEAFARVFARSPPAWADKLSEYRAKHAEKLSKK-APEAAGS---------------------KPISIKGPKREREEAGGGGVGGEGARSSDAA-RKRKSRRVDV 588
            MDLGTILKKI+GG YPSFGDFDRDL+LMW+NCRTYN   T  +KEALRQEE+WSK SAKIE  LR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXX  LAPMA ATQL+R G+GRRVGLAS+LL+EPF AKLMYRHAS+R+PE C ERG+LPRDHPV+APL+QLL+LG+ AR M RA TFGVR V  G+TR VLPCVVALHARA      +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QDW+ WY D P +RR+VCTMLCRA+VRG DEAA +L PAA  A +RMADQRWLWA+LGEL+Q+SADA                                    P VLKPETL+L+L LFS GLE A V+DAVF KAL+LVA LLPLASP XXXXXXXXXXXXXXX                                       A +LPRSALEDVVNQAA RA RP RRP +EAEE + KEAFA+VFA+SPP WA+K+SEYRAK AEK  K  A +  G                       PISIKGPKR R+E G    G       DAA RK+KSRRV+V
Sbjct:  281 MDLGTILKKIKGGGYPSFGDFDRDLKLMWQNCRTYNGEGTQYNKEALRQEEEWSKISAKIENDLRHQETRPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPMAQATQLERDGIGRRVGLASVLLAEPFAAKLMYRHASERIPEVCCERGILPRDHPVYAPLVQLLDLGESARHMLRANTFGVREVKAGVTRAVLPCVVALHARA------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGQDWRGWYSDVPAIRRLVCTMLCRAMVRGSDEAAGVLMPAAKAAVKRMADQRWLWASLGELVQRSADASAAAVAAAPAKDGGGVVAAGVAGKKGGKEKGAV---PRVLKPETLLLVLELFSTGLELALVTDAVFIKALELVAGLLPLASPXXXXXXXXXXXXXXXXGGDKSKPKPSAPGKGAV----------------------AALLPRSALEDVVNQAAARAARPPRRPLSEAEELRAKEAFAKVFAKSPPGWANKVSEYRAKLAEKSRKGGAGKVVGGGDXXXXXXXXXXXXXXXXXXXXPISIKGPKRGRQETG----GXXXXXVDDAASRKKKSRRVNV 856          
BLAST of mRNA_L-elsbetiae_contig8173.17168.1 vs. uniprot
Match: A0A4P9Y7C8_9FUNG (Histone acetyltransferase GCN5 n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y7C8_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 4.580e-5
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MDLGTILKKIEGGAYPSFGDFDRDLRLMWKNCRTYNAADTPPHKEALRQE 50
            MDL T+  K+E   Y SF DF+RD+RL++ NCRT+N  DT  +K A R E
Sbjct:  346 MDLSTVEVKVENDEYRSFTDFERDVRLIFTNCRTFNDPDTRYYKSATRLE 395          
BLAST of mRNA_L-elsbetiae_contig8173.17168.1 vs. uniprot
Match: A0A0S7LS97_9TELE (BRPF3 (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LS97_9TELE)

HSP 1 Score: 54.3 bits (129), Expect = 6.500e-5
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0
Query:    1 MDLGTILKKIEGGAYPSFGDFDRDLRLMWKNCRTYNAADTPPHKEAL 47
            MD  T+  K+EG AY S GD ++D  LM  NC  YN+ DT  HK AL
Sbjct:  118 MDFSTMRSKLEGHAYCSIGDLEKDFELMISNCLKYNSKDTSFHKTAL 164          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8173.17168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KMY2_9PHAE1.050e-15159.18Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FZE7_ECTSI8.670e-14860.72Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4P9Y7C8_9FUNG4.580e-552.00Histone acetyltransferase GCN5 n=1 Tax=Piptocephal... [more]
A0A0S7LS97_9TELE6.500e-551.06BRPF3 (Fragment) n=2 Tax=Poeciliopsis prolifica Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..46
e-value: 3.7E-11
score: 42.9
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..43
score: 11.726
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..87
e-value: 1.9E-17
score: 65.1
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..62
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 1..99
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING 2A-RELATEDcoord: 1..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8173contigL-elsbetiae_contig8173:345..5989 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8173.17168.1mRNA_L-elsbetiae_contig8173.17168.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8173 45..8800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8173.17168.1 ID=prot_L-elsbetiae_contig8173.17168.1|Name=mRNA_L-elsbetiae_contig8173.17168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=589bp
MDLGTILKKIEGGAYPSFGDFDRDLRLMWKNCRTYNAADTPPHKEALRQE
EQWSKASAKIEESLRQQESSAGQAAATGSSNKRKSSSGGGGGGGSLLSSQ
DDARRTGSGGGAGGAGAPLAPMAPATQLDRHGLGRRVGLASILLSEPFVA
KLMYRHASDRVPEACGERGMLPRDHPVFAPLLQLLNLGDYARPMFRAGTF
GVRSVDDGLTRTVLPCVVALHARAEGAVAASRRRSSSSSGSSSSSSNAAA
LPVSDAEKEEDAAAAAQQDWKAWYKDFPVVRRMVCTMLCRALVRGCDEAA
AMLTPAATVAARRMADQRWLWATLGELLQKSADAAAAAAAATGGGGERGG
ASAGGGAAVGKKNGKEKRAAPPVLKPETLMLILRLFSIGLESAAVSDAVF
FKALDLVANLLPLASPSPPASAAGASTAGATSGGGGGGGGSSSSSDSKRK
PPPLPLPGKAASVAGAGAGAAAVILPRSALEDVVNQAAIRATRPTRRPRT
EAEEEQIKEAFARVFARSPPAWADKLSEYRAKHAEKLSKKAPEAAGSKPI
SIKGPKREREEAGGGGVGGEGARSSDAARKRKSRRVDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf