prot_L-elsbetiae_contig8167.17163.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8167.17163.1
Unique Nameprot_L-elsbetiae_contig8167.17163.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
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BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: D8LL88_ECTSI (Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL88_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 7.780e-54
Identity = 91/99 (91.92%), Postives = 94/99 (94.95%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVLVVGNAKCGKSSIISRFV+NRFSSDY STVGADYAMKDV L+ GRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK  +D
Sbjct:  353 KVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAMKDVSLENGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEID 451
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: A0A836CPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 5.910e-41
Identity = 72/99 (72.73%), Postives = 84/99 (84.85%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVLVVGNAKCGK+SII R+V+ RF+S+Y +TVGADY  KDV    G  VRLQLWDIAGQDRFA+LTRAYFRRA+ AVVVCD+TREGT++A+ RWK  LD
Sbjct:  366 KVLVVGNAKCGKTSIIQRYVHGRFTSEYTTTVGADYLKKDVLAPDGTCVRLQLWDIAGQDRFARLTRAYFRRARAAVVVCDITREGTYEAVSRWKDELD 464
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: W7U2E0_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2E0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.210e-37
Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            K+LVVGNAKCGK+S+I RFV   F + Y STVGADY  +DV L+ GR VRLQLWDIAGQDRF  LTR YF RAKG +VVCD+TRE TF+A+  WK+ +D
Sbjct:  233 KLLVVGNAKCGKTSVIRRFVQGNFKNAYVSTVGADYLKRDVILKDGRPVRLQLWDIAGQDRFVHLTRVYFTRAKGVLVVCDLTREKTFEAVRSWKLEID 331
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: A0A2D4BRT2_PYTIN (Rab32/38 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRT2_PYTIN)

HSP 1 Score: 134 bits (338), Expect = 3.770e-36
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVLVVGNA+CGK+S I RFV+  FS +Y ST+GAD+  K V      ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DA+V WK  +D
Sbjct:  139 KVLVVGNARCGKTSTIRRFVSKDFSDEYVSTIGADFVEKVVDYDDNLRLHLQLWDIAGQDRFAKLTRAYFRDAKGALIVCDITRENTIDAVVTWKSEID 237
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: K3X7B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7B8_GLOUD)

HSP 1 Score: 134 bits (337), Expect = 4.720e-36
Identity = 62/99 (62.63%), Postives = 78/99 (78.79%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVL+VGNA+CGK+S I +FV+ +FS +Y ST+GAD+  K +      ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DAIV WK  +D
Sbjct:  127 KVLIVGNARCGKTSTIRQFVSKQFSENYVSTIGADFVEKIIEYDAQLKISLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRENTIDAIVNWKSEID 225
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: A0A8K1FMK4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMK4_PYTOL)

HSP 1 Score: 130 bits (328), Expect = 4.360e-35
Identity = 62/99 (62.63%), Postives = 75/99 (75.76%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVLVVGNA+CGK+S I RFV+ +FS  Y ST+GAD+  K +      ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TR  T DA+  WK  LD
Sbjct:   97 KVLVVGNARCGKTSTIRRFVSKQFSDHYVSTIGADFVEKVIDYDDSLRLHLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRANTIDAVETWKNELD 195
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: D0NCF8_PHYIT (Rab32/38 family GTPase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCF8_PHYIT)

HSP 1 Score: 127 bits (320), Expect = 6.680e-35
Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVL+VGNA+CGK+S I RF  ++F+ +Y ST+GAD+  K +       + LQLWDIAGQDRFAK TR YFR A+GAV+VCD+TR  T DA+V WK  +D
Sbjct:    2 KVLIVGNARCGKTSTIRRFTQDKFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQDRFAKFTRGYFREARGAVIVCDITRANTIDAVVNWKNEID 100
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: A0A484E690_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E690_BRELC)

HSP 1 Score: 129 bits (325), Expect = 1.940e-34
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVL+VGNA+CGK+S I RF  N F  +Y ST+GAD+  K +       + LQLWDIAGQDRFAK TR YFR A+GAV+VCD+TR  T DA+V+WK  +D
Sbjct:  119 KVLIVGNARCGKTSTIRRFTKNEFKEEYVSTIGADFVEKIIRYDANLTISLQLWDIAGQDRFAKFTRGYFREARGAVIVCDITRTNTIDAVVKWKHEID 217
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: A0A5D6Y1Q7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Q7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.100e-34
Identity = 61/99 (61.62%), Postives = 76/99 (76.77%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVLVVGNA+CGK+S I +FV+ +FS  Y ST+GAD+  K +      ++ LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DA+  WK  +D
Sbjct:  156 KVLVVGNARCGKTSTIRQFVSRQFSESYVSTIGADFVEKVIEYDAQLKISLQLWDIAGQDRFAKLTRAYFRDAKGALIVCDITRENTVDAVTTWKREID 254
[Close]
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Match: G4ZV73_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZV73_PHYSP)

HSP 1 Score: 126 bits (317), Expect = 2.270e-34
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0 
Query:    1 KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD 99
            KVL+VGNA+CGK+S I RF  + F+ +Y ST+GAD+  K +       + LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK  +D
Sbjct:    2 KVLIVGNARCGKTSTIRRFTQDEFNEEYVSTIGADFVEKIIEYDEHLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVNWKNEID 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8167.17163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL88_ECTSI7.780e-5491.92Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID... [more]
A0A836CPW2_9STRA5.910e-4172.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U2E0_9STRA1.210e-3766.67Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
A0A2D4BRT2_PYTIN3.770e-3664.65Rab32/38 family GTPase, putative n=1 Tax=Pythium i... [more]
K3X7B8_GLOUD4.720e-3662.63Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FMK4_PYTOL4.360e-3562.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0NCF8_PHYIT6.680e-3557.58Rab32/38 family GTPase, putative n=1 Tax=Phytophth... [more]
A0A484E690_BRELC1.940e-3458.59Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A5D6Y1Q7_9STRA2.100e-3461.62Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4ZV73_PHYSP2.270e-3458.59Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 23..39
score: 30.05
coord: 42..64
score: 37.04
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..99
e-value: 2.4E-10
score: 19.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..99
e-value: 6.8E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR24073:SF839RAS-RELATED PROTEIN RAB-38coord: 1..96
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..96
NoneNo IPR availablePROSITEPS51419RABcoord: 1..99
score: 18.121
IPR001806Small GTPasePFAMPF00071Rascoord: 1..95
e-value: 6.1E-29
score: 100.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 1..91
e-value: 6.1E-18
score: 63.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8167contigL-elsbetiae_contig8167:7558..8247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8167.17163.1mRNA_L-elsbetiae_contig8167.17163.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8167 7558..8247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8167.17163.1 ID=prot_L-elsbetiae_contig8167.17163.1|Name=mRNA_L-elsbetiae_contig8167.17163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
KVLVVGNAKCGKSSIISRFVNNRFSSDYRSTVGADYAMKDVCLQGGRQVR
LQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKVTLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase