prot_L-elsbetiae_contig8124.17122.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8124.17122.1
Unique Nameprot_L-elsbetiae_contig8124.17122.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length476
Homology
BLAST of mRNA_L-elsbetiae_contig8124.17122.1 vs. uniprot
Match: D7FNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG7_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 8.240e-162
Identity = 310/478 (64.85%), Postives = 343/478 (71.76%), Query Frame = 0
Query:    1 QATLQEFLRSRDGNEMMGDLSEGLEARREDLVCPDPSRCYPKTAEDRAALQSGSVVVKGYRAKLPPQAVSELVALSDELDINEVACVELWSHVNEPFQRRELEQRLSEPPGSLSDDLPLAARKLFYLERRNLLLLESELFKKAALVQDLSAAKKAVIDREIFDLLERGLASNLMSFVAKLLGPEGMRQQTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---GVSEGAVERREEFMLESLVCAVEVIFFIFYSYQIKPDEAKQLVALVETAGRELLALQKAVAVAESGGALAXXXXXXXXXXXXXXXLQGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRDVFRLCAVMEVTSVLLCTLSVALSQDNALYSRSVPGAKNESGNELSSLALVSGXXXXXXXXXXQPLSPGDAEVIVYLNKEICTRVWDHQQVCDPISMV 475
            QA LQEFLRSR+GNEM+GDLSEGLEARR+DL+CPDPSRC+P+T EDRAALQSGSVVVKG+RAKLPPQAVSELVALSDELDINEV CV+LWS VNEP+QRR LE+RLS+P GSLS+DLPLAARKLFYLERRNLL+ E+ELF KAALV+DLS AKKAVIDREIF LLE+ LASNLMSFVAKLLGPEG+R+ T+P                                   XXXXXX     +SEGA ERREEFML+SLVCAVEV+FFI+YSYQIKPDEAKQLV LVETAGRELLALQK VA A+     A               L G                           XXXXXXXXXXXXXXXXXXXXX      RDVFRLCA +EVTSVLLCTLS+ALSQ+NALYSRSVPGAKN   N L++LALV G          QPL  GD EVI++LNKEIC+R WDH QV   + MV
Sbjct:   11 QAMLQEFLRSREGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGSVVVKGFRAKLPPQAVSELVALSDELDINEVVCVDLWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELF-KAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTSPSSTAAMLGSSQAGAPTGLFGAAPAATAAPAPGQAGXXXXXXXXXXSMSEGAAERREEFMLDSLVCAVEVLFFIYYSYQIKPDEAKQLVTLVETAGRELLALQKTVAEADGIPPTATPATAGGGGLHYTNGLSG--------------YGFGHGATAAGATXXXXXXXXXXXXXXXXXXXXXDEAERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSVPGAKNNGSNALNALALVVGGGGG------QPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMV 467          
BLAST of mRNA_L-elsbetiae_contig8124.17122.1 vs. uniprot
Match: A0A6H5L7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W6_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 3.360e-88
Identity = 175/271 (64.58%), Postives = 196/271 (72.32%), Query Frame = 0
Query:    1 QATLQEFLRSRDGNEMMGDLSEGLEARREDLVCPDPSRCYPKTAEDRAALQSGSVVVKGYRAKLPPQAVSELVALSDELDINEVACVELWSHVNEPFQRRELEQRLSEPPGSLSDDLPLAARKLFYLERRNLLLLESELFKKAALVQDLSAAKKAVIDREIFDLLERGLASNLMSFVAKLLGPEGMRQQTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVSEGAVERREEFMLESLVCAVEVIFFIFYSYQIKPD 271
            QA LQEFLRSRDGNEM+GDLSEGLEARR+DL+CPDPSRC+P+T EDR ALQSGSVVVKG+RAK                             VNEP+QRR LE+RLS+P GSLS+DLPLAARKLFYLERRNLL+ E+ELF KAALV+DLS AKKAVIDREIF LLE+ LASNLMSFVAKLLGPEG+R+ T P                        XXXXXXXXXXXXX       SEGA ERREEFML+SLVCAVEV+FFI+YSYQ + +
Sbjct:   19 QAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRTALQSGSVVVKGFRAK-----------------------------VNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELF-KAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPTSTAATVGSSQAGAPTGLFGAAPAXXXXXXXXXXXXX-------SEGAAERREEFMLDSLVCAVEVLFFIYYSYQAREE 252          
BLAST of mRNA_L-elsbetiae_contig8124.17122.1 vs. uniprot
Match: A0A6H5L8I6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.120e-28
Identity = 64/99 (64.65%), Postives = 74/99 (74.75%), Query Frame = 0
Query:  377 RDVFRLCAVMEVTSVLLCTLSVALSQDNALYSRSVPGAKNESGNELSSLALVSGXXXXXXXXXXQPLSPGDAEVIVYLNKEICTRVWDHQQVCDPISMV 475
            RDVFRLCA +EVTSVLLCTLS+ALSQ+NALYSRS+PGAKN   N L++LALV G          QPL  GD EVI++LNKEIC+R WDH QV   + MV
Sbjct:   93 RDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSLPGAKNNGRNALNALALVVGGGGG------QPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMV 185          
BLAST of mRNA_L-elsbetiae_contig8124.17122.1 vs. uniprot
Match: F0YDE5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDE5_AURAN)

HSP 1 Score: 63.5 bits (153), Expect = 7.130e-7
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 0
Query:   41 PKTAEDRAALQSGSVVVKGYRAKLPPQAVSELVALSDELDINEVACVELWSHVNEPFQRRELEQRLS-EPPGSLSDDLPLAARKLFYLERRNLLLLESELFKKAALVQDLSAAKKAVIDREIFDLLERGLASNLMSFVAKLLG 182
            P  A+ +A   +  + ++G    L P+    + ALSDEL ++E AC+EL++ V +  +RREL +RL     G+L DD+  AAR+L+Y E R  L    EL  K AL   L  AKK ++       L   + + L++ V  L G
Sbjct:   46 PAPAKRQALAGNQPLQLRGRPQALQPRTARLVAALSDELRLDEEACLELFAKVTDRARRRELAERLGLARGGALDDDVAGAARRLWYFEARCGLRALGELV-KGALDGRLPRAKKRILGDAAVACLRADVPATLLAGVKALSG 187          
BLAST of mRNA_L-elsbetiae_contig8124.17122.1 vs. uniprot
Match: A0A7S0TB40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TB40_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.580e-5
Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 0
Query:   37 SRCYPKTAEDRAALQSGSVVVKGYRAKLPPQAVSELVALSDELDINEVACVELWSHVNEPFQRRELEQRLSEPPGSLSDDLPLAARKLFYLE 128
            S   P  A+ +  +  G++ ++G    +P     E+  LSDEL ++E AC+ELW+ V+    RR +  R      SL  +L  AA+ L+YLE
Sbjct:   25 SAAGPDGAKRQRLVSGGAMELRGSAQAVPAATAQEVARLSDELGLDEEACLELWAEVSSRAARRRVASRAGLGERSLDGELYGAAKLLWYLE 116          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8124.17122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNG7_ECTSI8.240e-16264.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7W6_9PHAE3.360e-8864.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8I6_9PHAE3.120e-2864.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
F0YDE5_AURAN7.130e-734.97Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S0TB40_9STRA1.580e-533.70Hypothetical protein (Fragment) n=1 Tax=Chrysocyst... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021827Nucleoporin Nup186/Nup192/Nup205PFAMPF11894Nup192coord: 40..150
e-value: 1.5E-7
score: 29.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 267..475
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8124contigL-elsbetiae_contig8124:556..7075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8124.17122.1mRNA_L-elsbetiae_contig8124.17122.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8124 556..7075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8124.17122.1 ID=prot_L-elsbetiae_contig8124.17122.1|Name=mRNA_L-elsbetiae_contig8124.17122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=476bp
QATLQEFLRSRDGNEMMGDLSEGLEARREDLVCPDPSRCYPKTAEDRAAL
QSGSVVVKGYRAKLPPQAVSELVALSDELDINEVACVELWSHVNEPFQRR
ELEQRLSEPPGSLSDDLPLAARKLFYLERRNLLLLESELFKKAALVQDLS
AAKKAVIDREIFDLLERGLASNLMSFVAKLLGPEGMRQQTAPPAAANNTQ
QVGVAAGAFGAAAPAPGQAGGGAPAAAAAAAATGGVSEGAVERREEFMLE
SLVCAVEVIFFIFYSYQIKPDEAKQLVALVETAGRELLALQKAVAVAESG
GALAAGGGGGGSGGGGGGGLQGNSNTGSFGLGAAAGAAGAGAFASFGGGR
GGGFGFGGGDGGPGGAAGAAAAAASRRDVFRLCAVMEVTSVLLCTLSVAL
SQDNALYSRSVPGAKNESGNELSSLALVSGGGGGGGGGGGQPLSPGDAEV
IVYLNKEICTRVWDHQQVCDPISMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021827Nup186/Nup192/Nup205