prot_L-elsbetiae_contig81.17093.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig81.17093.1
Unique Nameprot_L-elsbetiae_contig81.17093.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length512
Homology
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BLAST of mRNA_L-elsbetiae_contig81.17093.1 vs. uniprot
Match: D7FV95_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV95_ECTSI)

HSP 1 Score: 480 bits (1236), Expect = 2.050e-164
Identity = 256/372 (68.82%), Postives = 304/372 (81.72%), Query Frame = 0 
Query:  142 DDQLLKEVREALPELQGEGADGDSAMGLEARREDPFPTSSERGALEAASASQQALLAGKRGLLIDVEVRQLDDAHAEFDQDMLIDFVTDVSKALATVSGRTKVLLRGAHLAEKATEMLQRANTEGEEVGIEPRRDISFCSFQMADTD-EDDEDSVHKFASMLGLG-EEERVFVVACPQRLADVTVLREVLLAANGRPVVVLNPRMPYTPFEMEAFETVYQLRQHNVQPAKVNPKAKRRSRMPRLTRLSQSQQHIYSEPGQPIPRVLATRAFPDDFKLYVDVDGKGFQLEGTYGTAPQPAILAMTAQKRISEFQEKISAEEKTVSAQSRGFESNEEDDSFWDTINDDLAEGEEPFIEPPLPSEEEINSRLRGD 511
            D QLL+EVR+ALPEL+GEG         E +RE+PFPTSS+RGALEA+SASQQALLAGKRGL+IDVEVRQ+DD HAEFD++M IDF TD+SKALATVSGR KVLLRG HLAEKATEMLQ+ANT+GEE GIEPRRDISFCSFQMA+TD EDDE S+  FAS LGL  EEERVF++ CP+RL DVTVLRE++L A GRPVV++ PRMPY P E + FETVYQL+Q+NVQP   NPK  +R +  RLTRL Q+QQ IYSE GQ IPRVL TRAFP DFKLY+D+DGKGFQLE TY   PQPA+++ TAQ +I E Q++++ +EK V A+  G E  ++DD  WDTINDDL EGEEPF+ PP+P+E+EIN+RLR D
Sbjct:   45 DGQLLREVRQALPELEGEGP--------ETKRENPFPTSSDRGALEASSASQQALLAGKRGLIIDVEVRQMDDTHAEFDEEMQIDFATDISKALATVSGRVKVLLRGIHLAEKATEMLQKANTKGEEEGIEPRRDISFCSFQMANTDDEDDEKSMRDFASTLGLANEEERVFLMVCPRRLVDVTVLREIILVAKGRPVVLITPRMPYMPVETDGFETVYQLKQYNVQPVPTNPK--KRIKNVRLTRLGQNQQTIYSELGQVIPRVLVTRAFPGDFKLYLDIDGKGFQLEKTYDAKPQPAVVSFTAQNKIREVQQRVTLQEKRVVAKDHGVE--DDDDFDWDTINDDLEEGEEPFVVPPMPTEDEINARLRDD 404
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig81.17093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV95_ECTSI2.050e-16468.82DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 441..461
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..511
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 178..437
e-value: 1.3E-13
score: 51.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig81contigL-elsbetiae_contig81:5629..11965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig81.17093.1mRNA_L-elsbetiae_contig81.17093.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig81 5629..11965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig81.17093.1 ID=prot_L-elsbetiae_contig81.17093.1|Name=mRNA_L-elsbetiae_contig81.17093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=512bp
PGTLLPPSLFCLLIFLSQPLFLYRSHDPGIRAYEFRFHRPEKTPIMHAVE
KYLCTSLWVLLWSSTTSAWVLPLPGIGAPARASLQGKTRRTTTLGGARMG
DFFNSGGEEDDDAAAAREARESLERMWASSASGSSQEQDNGDDQLLKEVR
EALPELQGEGADGDSAMGLEARREDPFPTSSERGALEAASASQQALLAGK
RGLLIDVEVRQLDDAHAEFDQDMLIDFVTDVSKALATVSGRTKVLLRGAH
LAEKATEMLQRANTEGEEVGIEPRRDISFCSFQMADTDEDDEDSVHKFAS
MLGLGEEERVFVVACPQRLADVTVLREVLLAANGRPVVVLNPRMPYTPFE
MEAFETVYQLRQHNVQPAKVNPKAKRRSRMPRLTRLSQSQQHIYSEPGQP
IPRVLATRAFPDDFKLYVDVDGKGFQLEGTYGTAPQPAILAMTAQKRISE
FQEKISAEEKTVSAQSRGFESNEEDDSFWDTINDDLAEGEEPFIEPPLPS
EEEINSRLRGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995