prot_L-elsbetiae_contig809.17081.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig809.17081.1
Unique Nameprot_L-elsbetiae_contig809.17081.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length652
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig809.17081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 330..350
NoneNo IPR availableCOILSCoilCoilcoord: 572..604
NoneNo IPR availableCOILSCoilCoilcoord: 371..391
NoneNo IPR availableCOILSCoilCoilcoord: 649..652
IPR017956AT hook, DNA-binding motifPRINTSPR00929ATHOOKcoord: 103..113
score: 53.03
coord: 17..27
score: 70.83
coord: 78..89
score: 33.33
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 105..117
e-value: 2.7
score: 12.8
coord: 80..92
e-value: 120.0
score: 3.5
coord: 17..29
e-value: 0.81
score: 15.8
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 542..563
e-value: 8.8
score: 13.8
coord: 181..201
e-value: 79.0
score: 5.3
coord: 293..313
e-value: 310.0
score: 0.1
coord: 601..621
e-value: 64.0
score: 6.1
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 601..630
score: 8.974

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig809contigL-elsbetiae_contig809:7461..15302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig809.17081.1mRNA_L-elsbetiae_contig809.17081.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig809 7460..15302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig809.17081.1 ID=prot_L-elsbetiae_contig809.17081.1|Name=mRNA_L-elsbetiae_contig809.17081.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=652bp
ESPAGSKRGERSMEDAKRGRGRPPKISKTAKEKPPEQQPGDGADMMDVVE
PATREGQAQQAPPTAGEGECSAADGGAKAPKRRGRGPSTESSSPAAEVAA
VPASVKKRGRPSKKQSPEQGPVSPSPSPLRRGPDRSKKAAAAEDDAGGQA
GPGRGGLPNKKTAGSPAQAKGDESEEEPQQLTCGKCQKTFGSKAGWTYHT
RYNVCDAAGSPKPKPKPKPKPASTAEGVDSEKYDPEPSPPARRARGKDSS
ASSARGKGKPAAKAAAAAAAAAAAATAAAAAAAKEGDTDPSQRTCDKCKK
MLGSLGAFKYHTANDVCKPKPKPTAAAAAAAAAEEEAVRHEATLENAKDD
EGKNKKSKKNKGQDDADAAAAAAAEEEAVRHETTLERAKDDKGKKNKKSK
KNNGQDDADAAAAAAAAAAEEAVGRETTLENAKDDKGKKKKKNKMTKGED
DASRNTNRKASVKASAAGGAGAGSAAAAAAGSGDDGNSGRGDGGGKGPRG
DPSETTGKPAAAASGKKKGKKEEEDGKKEEKQGQEIEKDLELTCEKCQKT
FATRPGWKYHTSHSVCDAKPSEPSTEEEKKQQEEKEKQQEKEDAQAKVDK
LTCEKCQKTFAGLSGLRYHTSRSVCAAAKPPESPPSAEEEGQDKDGEKEE
RE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif
IPR013087Znf_C2H2_type