prot_L-elsbetiae_contig8073.17067.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8073.17067.1
Unique Nameprot_L-elsbetiae_contig8073.17067.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: A0A6H5K9V4_9PHAE (TFIID_20kDa domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V4_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 2.630e-64
Identity = 109/130 (83.85%), Postives = 113/130 (86.92%), Query Frame = 0
Query:    1 MKPLHPVVVPPVEPEPKEAKLVGPMNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIGDPSRVGTRREAKAGRTKLNAAIAADRAAKPS 130
            MKPLHPVVVPPVEPEPKEAKLVGPMNGMRLP LM+EVDPAY+LH DTEELLLALAQDHIEGVAAAAVELAQHR SDTVELQDLQLCLEKDWDMPWLGIG     G  RE K GR +LN AIAA+RA   S
Sbjct:  390 MKPLHPVVVPPVEPEPKEAKLVGPMNGMRLPALMKEVDPAYSLHPDTEELLLALAQDHIEGVAAAAVELAQHRNSDTVELQDLQLCLEKDWDMPWLGIGARKMAGAERETKVGRARLNTAIAAERAKSAS 519          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: A0A8J4P713_APTPA (Transcription initiation factor TFIID subunit 12 (Fragment) n=1 Tax=Aptenodytes patagonicus TaxID=9234 RepID=A0A8J4P713_APTPA)

HSP 1 Score: 71.2 bits (173), Expect = 5.600e-13
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   29 RLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIG 99
            +L  L+ EVDP   L  D EE+LL +A D IE V  AA +LA+HRKS+T+E++D+QL LE+ W+M   G G
Sbjct:    7 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFG 77          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: V3Z331_LOTGI (Transcription initiation factor TFIID subunit 12 (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3Z331_LOTGI)

HSP 1 Score: 71.2 bits (173), Expect = 7.380e-13
Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   25 MNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWL-GIG 99
            ++  RL  L++EVDP   L  D EE+LL +A D IE V ++A ++A+HRKS+T+E++D+QL LE+ W+M WL G G
Sbjct:   14 LDKRRLQELVKEVDPLEQLDDDVEEVLLQVADDFIENVVSSACQIAKHRKSNTLEVKDVQLYLERTWNM-WLPGFG 88          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: A0A7S3BHN3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BHN3_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 7.570e-13
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   25 MNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDM--PWLGIGDPSRVGTRRE 109
            +   +L  L ++VDP  TL    +++L  +A D +E VAA A ELA+HR+S T+E +DLQL LEK+W+M  P L + D + + + R+
Sbjct:   10 LPAQKLQELAQQVDPTLTLDTTAQQILQDVADDFVENVAAFACELAKHRESPTLEAKDLQLALEKNWNMRLPGLAVADSAELKSIRK 96          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: A0A8C2V524_CHILA (Transcription initiation factor TFIID subunit 12 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2V524_CHILA)

HSP 1 Score: 71.2 bits (173), Expect = 7.570e-13
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   22 VGPMNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIG 99
            +  +   +L  L+ EVDP   L  D EE+LL +A D IE V  AA +LA+HRKS T+E++D+QL LE+ W+M   G G
Sbjct:   23 IAVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFG 100          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: A0A6A5FEQ6_PERFL (Transcription initiation factor TFIID subunit 12 n=2 Tax=Perca fluviatilis TaxID=8168 RepID=A0A6A5FEQ6_PERFL)

HSP 1 Score: 70.9 bits (172), Expect = 7.890e-13
Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query:   25 MNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIG 99
            ++  +L  L+ E+DP   L  D EE+LL +A D IE V  AA +LA+HRKS+T+E++D+QL LE+ W+M   G G
Sbjct:    3 LSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYG 77          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: F6WT81_CIOIN (Transcription initiation factor TFIID subunit 12 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6WT81_CIOIN)

HSP 1 Score: 72.8 bits (177), Expect = 8.970e-13
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0
Query:   14 PEPKEAKLVGPMNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIG 99
            P+ K+ K+   +N  RL  L+ E+DPA  L  D EE+L+ +  D IE V +A+ ELA+HR S+T+E++DL+L L+K W++   G G
Sbjct:   76 PQEKDNKI---LNRQRLQELIREIDPAEQLDEDVEEMLMQITDDFIENVVSASCELAKHRNSNTLEVKDLKLHLDKQWNISIPGYG 158          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: UPI000C6E3725 (transcription initiation factor TFIID subunit 12-like isoform X1 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E3725)

HSP 1 Score: 73.2 bits (178), Expect = 9.080e-13
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   25 MNGMRLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIG 99
            +N  RL  L+ EVDP   L  D EELLL +A D IE V   +  LA+HRKS+T+E++D+QL LEK+W+M   G G
Sbjct:  102 LNRQRLQDLVREVDPNEQLDDDVEELLLQIADDFIENVVTTSCLLAKHRKSNTLEVKDVQLSLEKNWNMWIPGFG 176          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: A0A1S3GUF3_DIPOR (Transcription initiation factor TFIID subunit 12 n=3 Tax=Amniota TaxID=32524 RepID=A0A1S3GUF3_DIPOR)

HSP 1 Score: 72.0 bits (175), Expect = 1.040e-12
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   29 RLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIG 99
            +L  L+ EVDP   L  D EE+LL +A D IE V  AA +LA+HRKS T+E++D+QL LE+ W+M   G G
Sbjct:   62 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMXIPGFG 132          
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Match: UPI001BC98491 (transcription initiation factor TFIID subunit 12-like n=1 Tax=Vulpes lagopus TaxID=494514 RepID=UPI001BC98491)

HSP 1 Score: 72.0 bits (175), Expect = 1.040e-12
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   29 RLPTLMEEVDPAYTLHADTEELLLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIGDPSRVGTRREAKAGRTKLN 118
            +L  L+ EVDP   L  D EE+LL +A D IE V  AA +LA+HRKS T+E++D+QL LE+ W+M   G G       R   KAG T+ +
Sbjct:   62 KLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEE---IRPYKKAGTTEAH 148          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8073.17067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9V4_9PHAE2.630e-6483.85TFIID_20kDa domain-containing protein n=1 Tax=Ecto... [more]
A0A8J4P713_APTPA5.600e-1350.70Transcription initiation factor TFIID subunit 12 (... [more]
V3Z331_LOTGI7.380e-1348.68Transcription initiation factor TFIID subunit 12 (... [more]
A0A7S3BHN3_9EUKA7.570e-1341.38Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A8C2V524_CHILA7.570e-1346.15Transcription initiation factor TFIID subunit 12 n... [more]
A0A6A5FEQ6_PERFL7.890e-1346.67Transcription initiation factor TFIID subunit 12 n... [more]
F6WT81_CIOIN8.970e-1343.02Transcription initiation factor TFIID subunit 12 n... [more]
UPI000C6E37259.080e-1350.67transcription initiation factor TFIID subunit 12-l... [more]
A0A1S3GUF3_DIPOR1.040e-1250.70Transcription initiation factor TFIID subunit 12 n... [more]
UPI001BC984911.040e-1245.56transcription initiation factor TFIID subunit 12-l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003228Transcription initiation factor TFIID subunit 12 domainPFAMPF03847TFIID_20kDacoord: 29..93
e-value: 1.4E-17
score: 63.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 25..93
e-value: 1.9E-18
score: 68.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 30..93
IPR037794Transcription initiation factor TFIID subunit 12PANTHERPTHR12264FAMILY NOT NAMEDcoord: 33..153
NoneNo IPR availablePRODOMPD012998coord: 25..99
e-value: 9.0E-13
score: 176.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8073contigL-elsbetiae_contig8073:4008..7381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8073.17067.1mRNA_L-elsbetiae_contig8073.17067.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8073 2740..7983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8073.17067.1 ID=prot_L-elsbetiae_contig8073.17067.1|Name=mRNA_L-elsbetiae_contig8073.17067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
MKPLHPVVVPPVEPEPKEAKLVGPMNGMRLPTLMEEVDPAYTLHADTEEL
LLALAQDHIEGVAAAAVELAQHRKSDTVELQDLQLCLEKDWDMPWLGIGD
PSRVGTRREAKAGRTKLNAAIAADRAAKPSSSSGSSSSWRKKAAKRRSTD
AASAAASNGANNAAALKKARAQAEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003228TFIID_TAF12_dom
IPR009072Histone-fold
IPR037794TAF12