prot_L-elsbetiae_contig8038.17026.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8038.17026.1
Unique Nameprot_L-elsbetiae_contig8038.17026.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8038.17026.1 vs. uniprot
Match: D7G3E1_ECTSI (Similar to camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E1_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 4.100e-25
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0 
Query:   29 MFLRGCKEPLEQYRECLMKNLKDWNGRGLHRGKLAEVKIHQLGQMNITRFDHQK 82
            MFLRGC+EPLEQYRECLMKNLKDW+GRGL R KL+ VKIHQLGQMNITRFDHQK
Sbjct:    1 MFLRGCREPLEQYRECLMKNLKDWHGRGLVRQKLSAVKIHQLGQMNITRFDHQK 54
[Close]
BLAST of mRNA_L-elsbetiae_contig8038.17026.1 vs. uniprot
Match: A0A6H5JUX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX4_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.870e-17
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:   16 MVMEAGTDLVDPGMFLRGCKEPLEQYRECLMKNLKDWNGR 55
            M  +AGTDLVD GMFLRGC+EP+EQYRECLMKNLKDW+GR
Sbjct:    1 MKKDAGTDLVDAGMFLRGCREPMEQYRECLMKNLKDWHGR 40
[Close]
BLAST of mRNA_L-elsbetiae_contig8038.17026.1 vs. uniprot
Match: A0A835ZCA7_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.940e-11
Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 0 
Query:   23 DLVDPGMFLRGCKEPLEQYRECLMKNLKDWNGRGLHRGKLAEVKIHQLGQMNITRFDHQK 82
            DL+D   FL+     LEQYREC M NL   +GRGL R KLA+V++H L  MNITR DHQK
Sbjct:    4 DLIDVRTFLK--PTGLEQYRECFMTNLWGGDGRGLSRRKLAQVQMHHLPDMNITRHDHQK 61
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8038.17026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3E1_ECTSI4.100e-2588.89Similar to camp and camp-inhibited cgmp 3,5-cyclic... [more]
A0A6H5JUX4_9PHAE1.870e-1782.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCA7_9STRA2.940e-1158.33SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8038contigL-elsbetiae_contig8038:5726..6550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8038.17026.1mRNA_L-elsbetiae_contig8038.17026.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8038 5726..6550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8038.17026.1 ID=prot_L-elsbetiae_contig8038.17026.1|Name=mRNA_L-elsbetiae_contig8038.17026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
HQRRPDISERKEGMSMVMEAGTDLVDPGMFLRGCKEPLEQYRECLMKNLK
DWNGRGLHRGKLAEVKIHQLGQMNITRFDHQK
back to top