prot_L-elsbetiae_contig8036.17024.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8036.17024.1
Unique Nameprot_L-elsbetiae_contig8036.17024.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length215
Homology
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: D7FRP7_ECTSI (General transcription factor IIH subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP7_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 9.460e-133
Identity = 194/208 (93.27%), Postives = 204/208 (98.08%), Query Frame = 0
Query:    1 MDDIDDHDDNAGAGYAWEKGFERTWEGVEEDEHGNIKAREDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            MD +DDHDDN GAGYAWEKGFERTWEGVEEDEHGNIK RE+GQRR+RRVRRRVGG+SIKRGMIRYLYLAIDLSKTM++GDMRPSRLAVTLRIVQDF+TNYFDQNPLSQLGILVTREGRA+K+TELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVV+YSSLSTCDPGDIHETIAKLKTH VRASVVGLGAEM
Sbjct:    1 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEM 208          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A835ZF22_9STRA (General transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF22_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.210e-79
Identity = 128/196 (65.31%), Postives = 156/196 (79.59%), Query Frame = 0
Query:   14 GYAWEKGFERTWEGVEEDEHGNIKA-REDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            GYAWEK FER+WE V+EDE GN+K   E   R SR  R  + GQ+IKRGMIRY++L IDLSK MSE DMRP+RLAVT ++V +F+  +FDQNPLSQLGI++TR+GRA++VT+LSGNPKAH+EAL +  DT+GE SLQNLLE+    L + PEYG+RE VVLY SL TCDPG+I +TIA LK H VR SVVGLGAE+
Sbjct:   24 GYAWEKSFERSWEDVQEDEQGNLKTDHERDARLSRGRRTALYGQAIKRGMIRYVFLCIDLSKGMSETDMRPNRLAVTTKVVAEFVRGFFDQNPLSQLGIIITRDGRAERVTDLSGNPKAHIEALARSLDTQGEPSLQNLLELTAHCLASAPEYGSREAVVLYGSLHTCDPGNILDTIALLKRHKVRCSVVGLGAEV 219          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A7S2Y0G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 6.690e-65
Identity = 118/222 (53.15%), Postives = 147/222 (66.22%), Query Frame = 0
Query:    3 DIDDHDDNAGAGYAWEKGFERTWEGVEEDEHGNIKAREDGQRR----------------SRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            D+   D+    GYAWEKGFERTWE VEEDE G ++  E   RR                S+         ++KRGMIR LYLA+DLSK M+EGD RP+R+A     + DFI  YFDQNPLSQLGI++TR+G   +V+ELSG+P+A + AL +   T+G ASLQN LEMA  SL+A PEY +REVVV+Y SLSTCDPGDIH T+ +L+   VR SVV L AE+
Sbjct:   18 DLTQCDEGQEGGYAWEKGFERTWEAVEEDEDGRLQLEELDSRRQLLEXXXXXXLLLEDYSQDPSAAGTAGAVKRGMIRSLYLALDLSKAMAEGDFRPNRMAAAAAALIDFIQEYFDQNPLSQLGIVITRDGICQRVSELSGSPQAQVNALKRALHTRGSASLQNTLEMALASLKATPEYASREVVVVYGSLSTCDPGDIHATLERLQKARVRVSVVHLSAEL 239          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A433Q0F6_9FUNG (VWFA domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433Q0F6_9FUNG)

HSP 1 Score: 201 bits (511), Expect = 6.430e-61
Identity = 106/211 (50.24%), Postives = 152/211 (72.04%), Query Frame = 0
Query:    3 DIDDHDDNAGAGYAWEKGFERTWEGVEEDEHGNIK---AREDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALT--KDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            D+   +D    GY WE+ ++R+W+ ++ED  G ++   A+   Q + RR+ R     +I+RG+IR+L+L IDLS+TM+E D+RPSRL +TL   + F+  YFDQNP+SQLGI++TR+G A+K+TELSGNP  H+ AL   K+ +T GE SLQN LE+A  SL  +P +G+REVV+++ +L+TCDPG+I+ETI  LK  NVR SVVGL AE+
Sbjct:   21 DVHGSEDPPQKGYDWEQEYKRSWDVLQEDSEGRLESAVAQLQQQAKRRRLLRDTA--TIQRGIIRHLFLVIDLSETMNEKDLRPSRLDLTLSYAEQFVLEYFDQNPISQLGIILTRDGVAEKLTELSGNPMEHVRALKNKKNQETSGEPSLQNALEVARASLTHIPSHGSREVVIIFGALTTCDPGNIYETIENLKKENVRVSVVGLAAEV 229          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A8H7UFT1_9FUNG (General transcription and DNA repair factor IIH n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UFT1_9FUNG)

HSP 1 Score: 206 bits (523), Expect = 9.160e-61
Identity = 106/211 (50.24%), Postives = 154/211 (72.99%), Query Frame = 0
Query:    3 DIDDHDDNAGAGYAWEKGFERTWEGVEEDEHGNIK---AREDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALT--KDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            D  +++DN   GY+WE+ ++R+W+ ++ED  G +    A    Q + RR+ R     +++RG+IR+L+L IDLS+ M+E D+RPSRL +TL   + F+T YFDQNP+SQLGI+V R+G A+++T+LSGNP  H+ AL   ++ +T GE SLQN L+MAC SL  VP +G+REV+V+Y SL+TCDPGDI++TIA+LK  +VR S VGL AE+
Sbjct:   21 DTHENEDNQQGGYSWEEEYKRSWDVLQEDAEGRLSSVVAHLQQQMKRRRLLRDTA--TVQRGIIRHLFLVIDLSEAMNEKDLRPSRLELTLTYARQFVTEYFDQNPISQLGIIVIRDGVAERLTDLSGNPTDHLRALKNKRNQETSGEPSLQNALDMACASLVNVPSHGSREVLVVYGSLTTCDPGDIYDTIAQLKKEHVRVSFVGLAAEI 229          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A8H7PGK2_MORIS (General transcription and DNA repair factor IIH n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PGK2_MORIS)

HSP 1 Score: 204 bits (519), Expect = 3.600e-60
Identity = 105/211 (49.76%), Postives = 152/211 (72.04%), Query Frame = 0
Query:    3 DIDDHDDNAGAGYAWEKGFERTWEGVEEDEHGNIK---AREDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALT--KDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            D  +++D  G GY+WE+ ++R+W+ ++ED  G +    A+   Q + RR+ R     +++RG+IR+ +L IDLS+ M+E D+RPSRL +TL   + F+  YFDQNP+SQLGI+V R+G A+++T+LSGNP  H+ AL   ++ +T GE SLQN L+MAC SL  VP +G+REV+V+Y SL+TCDPGDI++TIA LK  NVR S VGL AE+
Sbjct:   32 DTHENEDAQGGGYSWEEEYKRSWDVLQEDSEGRLSSVVAQLQQQMKRRRLLRDTA--TVQRGIIRHFFLVIDLSEAMNEKDLRPSRLELTLTYAKQFVMEYFDQNPISQLGIIVIRDGIAERLTDLSGNPTDHLRALKNKRNQETSGEPSLQNALDMACASLVNVPSHGSREVLVIYGSLTTCDPGDIYDTIATLKKENVRVSFVGLAAEI 240          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A1C7N3N9_9FUNG (General transcription and DNA repair factor IIH n=2 Tax=Mucorineae TaxID=1344963 RepID=A0A1C7N3N9_9FUNG)

HSP 1 Score: 198 bits (504), Expect = 1.840e-58
Identity = 99/204 (48.53%), Postives = 150/204 (73.53%), Query Frame = 0
Query:    8 DDNAGAGYAWEKGFERTWEGVEEDEHGNIKAREDGQRRSRRVRRRVGGQSI-KRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEA--LTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            DD+   GYAWE+ ++R+W+ ++ED  G + +     ++ R+ RR +   +I +RG+IR+L+L IDLS+ M+E D+RPSR+ +TL   Q F+  +FDQNP+SQLGI++TR+G A+K+TELSGNP  H++A  L K+++T GE SLQN L++A  S+  VP +G++EV++L+ SL+TCDP DIHET+  LK   VR ++VGL AE+
Sbjct:   24 DDHGNGGYAWEEEYKRSWDILQEDAEGRLSSVVSQLQQQRKRRRLLKDTAIIQRGIIRHLFLVIDLSEAMNEKDLRPSRVELTLTYAQQFVVEFFDQNPISQLGIIITRDGIAEKLTELSGNPTDHIKAIKLKKNTETSGEPSLQNALQLARASMLGVPSHGSKEVLLLFGSLTTCDPADIHETVQLLKKEMVRVNIVGLAAEV 227          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A1X2HRH6_SYNRA (General transcription and DNA repair factor IIH n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HRH6_SYNRA)

HSP 1 Score: 198 bits (503), Expect = 2.290e-58
Identity = 106/216 (49.07%), Postives = 158/216 (73.15%), Query Frame = 0
Query:    3 DIDD-----HDDNAG-AGYAWEKGFERTWEGVEEDEHGNIKAREDGQRRSRRVRRRVGGQS--IKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALT--KDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            D+DD      DD+AG AGY+WE+ ++R+W+ ++EDE G + +    Q + +R RRR+   +  I+RG+IR+L+L IDLS+ M+E D+RPSR+ +TL   + F+  +FDQNP+SQLGI+VTR+G A+K+TELSGNP  H  AL   K +DT GE SLQN L++A +S+  VP +G++E+++++ +L+TCDP DIHETI  L+  NVR ++VGL AE+
Sbjct:   12 DVDDTFDGNQDDDAGKAGYSWEEEYKRSWDILQEDEEGRLSS-VVAQLQQQRKRRRLLKDTAVIQRGIIRHLFLVIDLSEAMNERDLRPSRVELTLTYAEQFVYEFFDQNPISQLGIIVTRDGIAEKLTELSGNPNDHARALKAGKKTDTSGEPSLQNALQLARSSMVGVPSHGSKEILMVFGALTTCDPSDIHETIDLLQKENVRVNIVGLAAEV 226          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A6G0W889_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W889_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.510e-58
Identity = 99/199 (49.75%), Postives = 140/199 (70.35%), Query Frame = 0
Query:   14 GYAWEKGFERTWEGVEEDEHGNIK----AREDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            GYAWE  FER+W+G+EEDE G +K    A   G +   R+RR+   Q +++G+IRY+++ +DLSK MS+ D +P R AV    VQ FI +YFDQNP+SQLG++  +  +A+K+T+LSGNP  HME L +     GE SLQN LEMA  +L+ VP YG++E++V+Y SL+T DPGDI  T++ L+  ++R S VG+GAEM
Sbjct:    9 GYAWEGSFERSWDGIEEDESGALKVHSIAASSGDKA--RLRRQQMLQRVRKGLIRYVFVIVDLSKGMSQKDWKPHRCAVVTEEVQRFIADYFDQNPISQLGLIGIKSAKAEKLTDLSGNPSQHMEVLKRALTVHGEPSLQNALEMARNALKIVPSYGSKEIIVVYGSLTTTDPGDIFATLSSLQRESIRCSFVGMGAEM 205          
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Match: A0A0L0HAK2_SPIPD (General transcription and DNA repair factor IIH n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HAK2_SPIPD)

HSP 1 Score: 198 bits (503), Expect = 4.090e-58
Identity = 106/215 (49.30%), Postives = 157/215 (73.02%), Query Frame = 0
Query:    1 MDDIDDHD--DNAGAGYAWEKGFERTWEGVEEDEHGNIK---AREDGQRRSRRVRRRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNYFDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALTKDS--DTKGEASLQNLLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRASVVGLGAEM 208
            +DD + HD    +G GY+WE+ ++R+W+ ++EDE G+++   A    Q + RR+ R     +++RG+IR+LYL IDLS+ M+E D++PSR+  T+R+ ++FI  YFDQNPLSQLGI++TR+G A+++TEL+GNP  H  AL K S  + KGE SLQN LE+A TSL  VP +G+RE++VLY+SL+TCDP +I +T+  LK   +R S+VGL AE+
Sbjct:   22 IDDDEGHDLMGASGQGYSWEEEYKRSWDILQEDEQGSLQGVVASIQQQLKRRRLHRDTA--TVQRGIIRHLYLVIDLSRAMAELDLKPSRIECTMRLAEEFIGEYFDQNPLSQLGIIITRDGLAEQLTELTGNPTDHTSALQKRSNREPKGEPSLQNALELARTSLAHVPSHGSREILVLYASLTTCDPDNILDTLESLKRECIRVSMVGLSAEV 234          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8036.17024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRP7_ECTSI9.460e-13393.27General transcription factor IIH subunit n=2 Tax=E... [more]
A0A835ZF22_9STRA2.210e-7965.31General transcription factor IIH subunit n=1 Tax=T... [more]
A0A7S2Y0G9_9STRA6.690e-6553.15Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A433Q0F6_9FUNG6.430e-6150.24VWFA domain-containing protein n=1 Tax=Endogone sp... [more]
A0A8H7UFT1_9FUNG9.160e-6150.24General transcription and DNA repair factor IIH n=... [more]
A0A8H7PGK2_MORIS3.600e-6049.76General transcription and DNA repair factor IIH n=... [more]
A0A1C7N3N9_9FUNG1.840e-5848.53General transcription and DNA repair factor IIH n=... [more]
A0A1X2HRH6_SYNRA2.290e-5849.07General transcription and DNA repair factor IIH n=... [more]
A0A6G0W889_9STRA2.510e-5849.75Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0L0HAK2_SPIPD4.090e-5849.30General transcription and DNA repair factor IIH n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007198Ssl1-likePFAMPF04056Ssl1coord: 70..208
e-value: 4.2E-56
score: 189.8
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 59..213
e-value: 4.9E-56
score: 191.2
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 64..206
NoneNo IPR availablePANTHERPTHR12695GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2coord: 10..208
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 65..214
score: 9.196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8036contigL-elsbetiae_contig8036:5529..8987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8036.17024.1mRNA_L-elsbetiae_contig8036.17024.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8036 5529..8987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8036.17024.1 ID=prot_L-elsbetiae_contig8036.17024.1|Name=mRNA_L-elsbetiae_contig8036.17024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MDDIDDHDDNAGAGYAWEKGFERTWEGVEEDEHGNIKAREDGQRRSRRVR
RRVGGQSIKRGMIRYLYLAIDLSKTMSEGDMRPSRLAVTLRIVQDFITNY
FDQNPLSQLGILVTREGRADKVTELSGNPKAHMEALTKDSDTKGEASLQN
LLEMACTSLRAVPEYGNREVVVLYSSLSTCDPGDIHETIAKLKTHNVRAS
VVGLGAEMVREVVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007198Ssl1-like
IPR036465vWFA_dom_sf
IPR002035VWF_A