prot_L-elsbetiae_contig8023.17008.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI) HSP 1 Score: 276 bits (707), Expect = 6.000e-81 Identity = 200/377 (53.05%), Postives = 219/377 (58.09%), Query Frame = 0 Query: 1 MTSTAIFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAAD------------DRPETVTAADPAGRCLAALVAGCQLVVLPALRH--SRTLLKEKQS--------------------LCACFGMSTVSSFVTCFFIICDL--------------------------------------------------LVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 MTSTAI+TCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKAS LELYRVH DD + XXXXXXXXXXXXXXXXXXX A+G+YLELAGTFPLAGNIT+LA+IP DIL V+FG AKMALVAYD++LGRLET+SIHNFDAGAIGPGA DRP T++++DPAGRCLAA+VAGCQLVVLPA RH + E+ A G S L A + FIKAAAFLEGFHEP LALLYEPIQTCAGRLASKRSTCRL + SINL Q P Sbjct: 1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXX---------------ASGYYLELAGTFPLAGNITALAVIP------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXXXXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAP 356
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: A0A7K9T8I3_9AVES (CPSF1 factor (Fragment) n=1 Tax=Galbula dea TaxID=1109041 RepID=A0A7K9T8I3_9AVES) HSP 1 Score: 127 bits (319), Expect = 3.400e-29 Identity = 93/288 (32.29%), Postives = 138/288 (47.92%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 ++ Y+Q HPPTG++ A+F ++ R+LVVA S L++YR++HD A LEL TF GN+ S+A + + ++D L ++F DAK+++V YD L+T+S+H F+ + G + DP GRC L+ G +LVVLP R S L E + L G SSF+ + I D+ L I FL G++EPTL +LYEP QT GR+A ++ TC +V S+N+ Q P Sbjct: 1 MYAVYKQAHPPTGLEFAIFCHFFSSTERNLVVAGTSQLQVYRLNHDCETGAKGDRNGEGKGHREK----------------------------LELLATFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHIPQVRVDPDGRCAVMLIYGTRLVVLPFRRDS--LADEHEGL---VGEGQKSSFLPSYII--DVRELDEKLLNIIDMQFLYGYYEPTLLILYEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHP 253
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: S4RE76_PETMA (Cleavage and polyadenylation specific factor 1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RE76_PETMA) HSP 1 Score: 126 bits (316), Expect = 5.670e-29 Identity = 94/290 (32.41%), Postives = 140/290 (48.28%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVPFL 295 +++ +R++HPPTG++HAV+ ++ R+LVVA S L++YR+ HD TE+ LE +F L GNI S+A + + +D L +AF DAK+++V YD L+T+S+H F+ I G + V DP RC A LV G +LVVLP R TL E + G+S + DL L + FL G++EPTL +L+EP QT GR+A ++ TC +V S+N+AQ P + Sbjct: 1 MYSVHRKVHPPTGLEHAVYCHFFSSQERNLVVAGGSQLQIYRLIHD-----TESVSKGDKPTDGKPRKDK-----------------------LEFMSSFSLFGNIMSMASVRLSGSSRDALLLAFMDAKLSVVEYDPATHDLKTLSLHYFEEDEIKDGFHGNVHVPVVRVDPDARCAAMLVYGTRLVVLPFRRE--TLADEAEG-----GVSEGQKPSLLPSYVIDLRGLDEKLLNVLDMQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCGIVAISLNIAQRVHPII 255
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: UPI0009A38663 (cleavage and polyadenylation specificity factor subunit 1-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A38663) HSP 1 Score: 125 bits (314), Expect = 8.620e-29 Identity = 90/288 (31.25%), Postives = 138/288 (47.92%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 ++ YRQ HPPTG++ A++ S + R+LVVA S L++YR+ HD + LE +F L GN+ S+A + + ++D L ++F DAK+++V YD L+T+S+H F+ + G + + DP GRC L+ G QLVVLP R TL E+ + G SSF+ + I D+ L + FL G++EPTL +L+EP QT GR+A ++ TC +V S+N+ Q P Sbjct: 1 MYAVYRQAHPPTGIEFAIYCSFFSNTERNLVVAGTSQLQVYRLIHDAESSVKGDKSSEVKGRKEK----------------------------LEQMASFSLFGNVMSIASVQLAGSKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELKDGFVQNVHIPLVRVDPDGRCAVMLIYGTQLVVLPFRRD--TLSDEQDGV---MGEGQKSSFLPSYII--DVRELDEKLLNVIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHP 253
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: UPI0014035BA0 (cleavage and polyadenylation specificity factor subunit 1 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014035BA0) HSP 1 Score: 126 bits (316), Expect = 9.510e-29 Identity = 94/290 (32.41%), Postives = 140/290 (48.28%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVPFL 295 +++ +R++HPPTG++HAV+ ++ R+LVVA S L++YR+ HD TE+ LE +F L GNI S+A + + +D L +AF DAK+++V YD L+T+S+H F+ I G + V DP RC A LV G +LVVLP R TL E + G+S + DL L + FL G++EPTL +L+EP QT GR+A ++ TC +V S+N+AQ P + Sbjct: 1 MYSVHRKVHPPTGLEHAVYCHFFSSQERNLVVAGGSQLQIYRLIHD-----TESVSKGDKPTDGKPRKDK-----------------------LEFMSSFSLFGNIMSMASVRLSGSSRDALLLAFMDAKLSVVEYDPATHDLKTLSLHYFEEDEIKDGFHGNVHVPVVRVDPDARCAAMLVYGTRLVVLPFRRE--TLADEAEG-----GVSEGQKPSLLPSYVIDLRGLDEKLLNVLDMQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCGIVAISLNIAQRVHPII 255
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: A0A7K8XUE5_9PICI (CPSF1 factor (Fragment) n=2 Tax=Piciformes TaxID=9219 RepID=A0A7K8XUE5_9PICI) HSP 1 Score: 125 bits (314), Expect = 1.580e-28 Identity = 90/288 (31.25%), Postives = 137/288 (47.57%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 ++ Y+Q HPPTG++ A+F + ++LVVA S L +YR++HD P + LEL +F GN+ S+A + + ++D L ++F DAK+++V YD L+T+S+H F+ + G + DP GRC L+ G +LVVLP R TL +E L G SSF+ + I D+ L I FL G++EPTL +L+EP QT GR+A ++ TC +V S+N+ Q P Sbjct: 1 MYAVYKQAHPPTGLEFALFCHFFSPAEKNLVVAGTSQLYVYRLNHDSPTLSHPILEGKGHKEK------------------------------LELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPATHDLKTLSLHYFEEPELRDGFVQNVHIPQVRVDPDGRCAVMLIYGTRLVVLPFRRD--TLSEEHDGL---VGEGQKSSFLPSYII--DVRELDEKLLNIIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHP 251
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: UPI0018F6BB81 (cleavage and polyadenylation specificity factor subunit 1 isoform X1 n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F6BB81) HSP 1 Score: 125 bits (314), Expect = 1.750e-28 Identity = 92/288 (31.94%), Postives = 140/288 (48.61%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 ++ YRQ HPPTG++ A++ S + R+LVVA S L++YR+ HD E+T LE +F L GN+ S+A + + ++D L ++F DAK+++V YD L+T+S+H F+ + G + + DP GRC L+ G QLVVLP R TL E+ + G SSF+ + I D+ L + FL G++EPTL +L+EP QT GR+A ++ TC +V S+N+ Q P Sbjct: 1 MYAVYRQTHPPTGIEFAIYCSFFSNTERNLVVAGTSQLQVYRLIHDA--ESTVKGDKPSGRKEK-----------------------------LEQMASFSLFGNVMSIASVQLAGSKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELKDGFVQNIHIPLVRVDPDGRCAVMLIYGTQLVVLPFRRD--TLSDEQDGV---MGEGQKSSFLPSYII--DVRELDEKLLNVIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHP 250
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: A0A401T3J4_CHIPU (Uncharacterized protein n=7 Tax=Chondrichthyes TaxID=7777 RepID=A0A401T3J4_CHIPU) HSP 1 Score: 125 bits (314), Expect = 1.760e-28 Identity = 90/288 (31.25%), Postives = 138/288 (47.92%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 ++ YRQ HPPTG++ A++ S + R+LVVA S L++YR+ HD + LE +F L GN+ S+A + + ++D L ++F DAK+++V YD L+T+S+H F+ + G + + DP GRC L+ G QLVVLP R TL E+ + G SSF+ + I D+ L + FL G++EPTL +L+EP QT GR+A ++ TC +V S+N+ Q P Sbjct: 85 MYAVYRQAHPPTGIEFAIYCSFFSNTERNLVVAGTSQLQVYRLIHDAESSVKGDKSSEVKGRKEK----------------------------LEQMASFSLFGNVMSIASVQLAGSKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELKDGFVQNVHIPLVRVDPDGRCAVMLIYGTQLVVLPFRRD--TLSDEQDGV---MGEGQKSSFLPSYII--DVRELDEKLLNVIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHP 337
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: A0A7L1N947_RHICY (CPSF1 factor (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1N947_RHICY) HSP 1 Score: 124 bits (312), Expect = 3.010e-28 Identity = 91/293 (31.06%), Postives = 137/293 (46.76%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHHDDPNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRT-----LLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVP 293 ++ Y+Q HPPTG++ A+F + R+LVVA S L++YR++HD A LEL F GN+ S+A + + ++D L ++F DAK+++V YD L+T+S+H F+ + G + DP GRC L+ G +LVVLP R S + LL E Q SSF+ + I D+ L I FL+G++EPTL +L+EP QT GR+A ++ TC +V S+N+ Q P Sbjct: 1 MYAVYKQAHPPTGLEFAIFCHFFSTSERNLVVAGTSQLQVYRLNHDCETSAKGDRNGEGKGHKEK----------------------------LELVAAFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHPPRVRVDPDGRCAVMLIYGTRLVVLPFRRDSLSDEHDGLLPEGQK----------SSFLPSYII--DVRELDEKLLNIIDLQFLQGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHP 253
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Match: A0A210PLT2_MIZYE (Cleavage and polyadenylation specificity factor subunit 1 n=3 Tax=Pectinidae TaxID=6566 RepID=A0A210PLT2_MIZYE) HSP 1 Score: 124 bits (312), Expect = 3.210e-28 Identity = 86/295 (29.15%), Postives = 142/295 (48.14%), Query Frame = 0 Query: 6 IFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRV--HHDD---PNEATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGFYLELAGTFPLAGNITSLAIIPVQQQQQDILAVAFGDAKMALVAYDALLGRLETVSIHNFDAGAIGPGAADDRPETVTAADPAGRCLAALVAGCQLVVLPALRHSRTLLKEKQSLCACFGMSTVSSFVTCFFIICDLLVLAHVDSFIKAAAFLEGFHEPTLALLYEPIQTCAGRLASKRSTCRLVVFSINLAQVCVPFL 295 ++ Y+Q+HPPTG++H V+ + R+LV+A + L++YR+ DD P++ TE+ LE TF L GNI S+ + + +D L ++F DAK+++V YD L+T S+H F+ + G + + DP GRC A L+ G +LV+LP R + L++E ++ +SS++ DL +K FL G++EPT+ +LYEP+QT AGR A + +C +V S+N+ + P + Sbjct: 1 MYALYKQIHPPTGIEHCVYCNFFNTSERNLVIAAVNQLDVYRLIPEVDDVESPDKWTESKRKQK----------------------------------LESLATFSLFGNIMSMQHVKLPGAHRDALLLSFMDAKLSVVEYDPGTHDLQTTSLHYFEESVMKDGFSTNYDIPTIRVDPDGRCAAMLIYGNRLVILPFRRDA--LMEETDNVVGASKSPIMSSYII------DLRQFDEKIPNVKDFQFLHGYYEPTVFILYEPLQTWAGRTAVRADSCSIVAISLNIQERVHPII 253 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8023.17008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig8023.17008.1 ID=prot_L-elsbetiae_contig8023.17008.1|Name=mRNA_L-elsbetiae_contig8023.17008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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