prot_L-elsbetiae_contig802.17003.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig802.17003.1
Unique Nameprot_L-elsbetiae_contig802.17003.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: D8LR14_ECTSI (Flagellar associated protein, transcriptional coactivator-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR14_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 4.730e-86
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0
Query:    1 MSQDWSTVMISKTRPTATRGQKNAATAAAQRSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGKK 139
            MSQDW+TVMISKTRPTATRGQKNAATAAA RSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGKK
Sbjct:    1 MSQDWNTVMISKTRPTATRGQKNAATAAAARSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGKK 139          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A835ZEI2_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI2_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.410e-57
Identity = 96/137 (70.07%), Postives = 113/137 (82.48%), Query Frame = 0
Query:    3 QDWSTVMISKTRPTATRGQKNAATAAAQRSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGKK 139
            QDW TV ++K R   T+G KNAA A A R+GTL TE+++A GENKS+H  HMN+KKLD++T+  +H RVDR LAQAIQQARLGKK+TQKQLAT INEKPQVVGEYESGKA+PNPQLI K+ERALG RLPRP +  KK
Sbjct:    4 QDWDTVTLAKNRAPTTKGAKNAAVATALRTGTLQTEKRWAGGENKSTHAPHMNLKKLDEDTDNLKHDRVDRSLAQAIQQARLGKKLTQKQLATMINEKPQVVGEYESGKALPNPQLIVKIERALGTRLPRPKRASKK 140          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A7S2UVN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.100e-46
Identity = 88/119 (73.95%), Postives = 97/119 (81.51%), Query Frame = 0
Query:   21 QKNAATAAAQRSGTLDTERKFAAGENKSSHRGH-MNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGK 138
            QKN +   A RSG + TERKFAAGENKS H     NM+KLDDETEEF+H RVDR LA AIQQARL KKMTQK LAT INEKPQ+VGEYESG+AIPNPQ+IS++ERALGVRLPR G K K
Sbjct:    6 QKNQSLQRALRSGNVATERKFAAGENKSVHASTGKNMRKLDDETEEFKHDRVDRSLALAIQQARLAKKMTQKALATAINEKPQIVGEYESGRAIPNPQMISRMERALGVRLPRGGGKKK 124          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A7S4MPQ6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MPQ6_9STRA)

HSP 1 Score: 135 bits (340), Expect = 9.340e-38
Identity = 77/137 (56.20%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    3 QDWSTVMISKTRPTATRGQKNAATA--AAQRSGTLDTERKFAAGENKSSHRGH-MNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 136
            QDW  V + ++  +  +    +A    AA+ SG + TERK  AG N+S+H G  +N KKL+ E++E +H +VD+ L++AI QAR+ KKMTQK+LAT INEKPQV+GEYESGKAIPNPQ+ISK+ER LG +LPRPGKK
Sbjct:   10 QDWDAVNVGRSGASGRKAVPKSAAGITAAKASGLVATERKHGAGGNRSAHSGSGVNAKKLE-ESDELKHAKVDKSLSKAIMQARMAKKMTQKELATAINEKPQVIGEYESGKAIPNPQIISKMERKLGCKLPRPGKK 145          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A6U3S3Y8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S3Y8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.520e-36
Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 0
Query:    3 QDWSTVMIS------KTRPTATRGQKNAATAAAQRSGTLDTERKFAAGENKSSHRGH-MNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 136
            QDW  V +       KT P    G   A  A     G L TE+KF AG N+S+H G  +N KKL+ ET+E +H++VD+ L++AI QAR  KK+TQK LAT INEKPQV+ EYESGKAIPNPQ+ISK+ER LGV+LPRPGKK
Sbjct:   10 QDWGAVNVGSSSVRKKTVPKTAHGITQAKAA-----GLLATEKKFGAGGNRSAHSGAGVNAKKLE-ETDELKHSKVDKSLSKAIMQARTAKKLTQKDLATAINEKPQVIAEYESGKAIPNPQIISKMERKLGVKLPRPGKK 144          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A6U3TVK3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TVK3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 9.460e-36
Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 0
Query:    3 QDWSTVMISKTRPTATRGQKNA-ATAAAQRSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 136
            QDW  V + ++        K A     A+  G L TE+KF AG N+S+H   +N KK++D ++E +  +VD+ L++AIQQAR+ KKMTQK LAT+INEKPQVVGEYESGKA+PN Q+I K+ER LGV+LPRPGKK
Sbjct:   10 QDWGAVNVGRSSAGRVAVPKTAHGVTRAKAMGLLATEKKFGAGGNRSAHTASVNAKKIED-SDELKLNKVDKSLSKAIQQARMAKKMTQKDLATRINEKPQVVGEYESGKAVPNGQIIVKMERVLGVKLPRPGKK 143          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A067CG61_SAPPC (HTH cro/C1-type domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CG61_SAPPC)

HSP 1 Score: 129 bits (324), Expect = 1.090e-35
Identity = 77/136 (56.62%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    3 QDWSTVMISKTRPTATRGQ--KNAATAAAQRSGTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 136
            QDW     +K R     G   K AA   A+R+G + TE K   G N+S+H    NM+KLD++TE F+H  VDR L+QA+ +ARL K MTQK LAT INEKPQV+GEYESG+AIPNP +ISK+ERALG RLPR  KK
Sbjct:    7 QDWEVQGWNKARSGGRIGNESKEAALNRARRAGNVSTEVKHTNGLNRSAHGAAGNMRKLDEDTENFKHDTVDRSLSQALSKARLDKGMTQKALATAINEKPQVIGEYESGRAIPNPAIISKIERALGCRLPRGPKK 142          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: K3WS97_GLOUD (HTH cro/C1-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS97_GLOUD)

HSP 1 Score: 128 bits (322), Expect = 1.950e-35
Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 0
Query:    3 QDWSTVMISKTRPTATRGQKNAATAAAQRSGTLDTERKFAAGENKSSHRG-HMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGK 138
            QDWST   S   P A+   K+    AA+R G +  E K  AG NKSSH G ++NM+KL+++TE F+H  VDR L+QA+ +AR  KKMTQK LAT INEKPQV+ EYESGKAIPN Q+I+KLERALG +LPR   K K
Sbjct:    7 QDWSTAGWSNKGP-ASGAAKSQQMNAARRQGNVVAEAKHMAGTNKSSHSGANVNMRKLEEDTETFKHNVVDRSLSQALIKARTEKKMTQKALATTINEKPQVIAEYESGKAIPNGQIIAKLERALGAKLPRGAPKKK 142          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: A0A2D4BI28_PYTIN (HTH cro/C1-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI28_PYTIN)

HSP 1 Score: 128 bits (322), Expect = 2.000e-35
Identity = 79/138 (57.25%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    3 QDWSTVMISKTRPTATRG-QKNAATAAAQRSGTLDTERKFAAGENKSSHRGH-MNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGK 138
            QDWS        P   RG  K A    A+R G + TE+K+ AG NKS+H G  +N +KL+++T+ F+H  V R L+QA+ +AR+ KKMTQKQLAT INEKPQ+V EYESGKAIPN Q+ISKLERALGV+LPR  KK K
Sbjct:    7 QDWSVAGWGSKGPQ--RGVSKEAVLNQARRQGNVITEQKYNAGTNKSAHSGATVNARKLEEDTDNFKHDAVXRSLSQALMKARMDKKMTQKQLATTINEKPQIVAEYESGKAIPNGQVISKLERALGVKLPRGPKKKK 142          
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Match: K0SSW2_THAOC (HTH cro/C1-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSW2_THAOC)

HSP 1 Score: 129 bits (323), Expect = 2.770e-35
Identity = 72/136 (52.94%), Postives = 102/136 (75.00%), Query Frame = 0
Query:    3 QDWSTVMISKT-RPTATRGQKNAATAAAQRS-GTLDTERKFAAGENKSSHRGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEKPQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKK 136
            QDW +V + ++      +  K+AA  +  ++ G + TERK+ AG N S+H   +N +K++ E++E +H +VD+ L++AIQQAR+ KKMTQK LAT+INEKPQV+GEYE+GKAIPN Q+I K+ERALG +LPRPGKK
Sbjct:   10 QDWGSVNVGRSGAANRVKVPKSAAGVSRMKAMGIVQTERKYGAGGNASAHTASVNARKIE-ESDELKHNKVDKSLSKAIQQARMAKKMTQKDLATKINEKPQVIGEYENGKAIPNGQIIVKIERALGCKLPRPGKK 144          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig802.17003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR14_ECTSI4.730e-8698.56Flagellar associated protein, transcriptional coac... [more]
A0A835ZEI2_9STRA3.410e-5770.07Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A7S2UVN6_9STRA4.100e-4673.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4MPQ6_9STRA9.340e-3856.20Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A6U3S3Y8_9STRA1.520e-3656.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U3TVK3_9STRA9.460e-3654.81Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A067CG61_SAPPC1.090e-3556.62HTH cro/C1-type domain-containing protein n=3 Tax=... [more]
K3WS97_GLOUD1.950e-3557.66HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
A0A2D4BI28_PYTIN2.000e-3557.25HTH cro/C1-type domain-containing protein n=1 Tax=... [more]
K0SSW2_THAOC2.770e-3552.94HTH cro/C1-type domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 78..133
e-value: 3.1E-11
score: 53.3
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 79..130
e-value: 3.1E-13
score: 49.6
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 79..133
score: 13.053
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 3..71
e-value: 2.3E-19
score: 69.6
NoneNo IPR availableGENE3D1.10.260.40coord: 63..139
e-value: 1.7E-27
score: 96.6
NoneNo IPR availablePANTHERPTHR10245:SF15ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1coord: 1..132
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 1..132
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 75..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig802contigL-elsbetiae_contig802:5519..7487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig802.17003.1mRNA_L-elsbetiae_contig802.17003.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig802 2946..8338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig802.17003.1 ID=prot_L-elsbetiae_contig802.17003.1|Name=mRNA_L-elsbetiae_contig802.17003.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MSQDWSTVMISKTRPTATRGQKNAATAAAQRSGTLDTERKFAAGENKSSH
RGHMNMKKLDDETEEFQHTRVDRGLAQAIQQARLGKKMTQKQLATQINEK
PQVVGEYESGKAIPNPQLISKLERALGVRLPRPGKKGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001387Cro/C1-type_HTH
IPR013729MBF1_N
IPR010982Lambda_DNA-bd_dom_sf