prot_L-elsbetiae_contig8019.17001.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8019.17001.1
Unique Nameprot_L-elsbetiae_contig8019.17001.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1016
Homology
BLAST of mRNA_L-elsbetiae_contig8019.17001.1 vs. uniprot
Match: D8LNE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE5_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 4.880e-156
Identity = 469/1095 (42.83%), Postives = 568/1095 (51.87%), Query Frame = 0
Query:    1 MDAIRKAQVAEVEALEEIVGTLASKQQSSIKKLRQQMDTIIAWKTQIVLQDRKVAARREAAKATNRENVEKVAGDAVNSTVXXXXXXXXXXXGTIEGVDRQSDAESSALVDEDKEDGESIIEEPIEQGAPLSDDVVFLMHRVTVLERDLVKLQEMWDMNKGQRVIEVWMSILNRKRYKPSNIDDPVECAIVTLQNWWRDMLVTKLDWRSSSGSSTXXXXXXXXXKAKEEDSPRMSTQGEM---DAESEHTASSSPENATTGDAIKRPAQARKAIPPSDQSGQRSXXXXXXXXXSSEEDFGNREDQVLSVDAPLVPSTLSFSTEKTLKDLGEADFSDAEHQERQQHPQESEKAEPVPSPASGRHAAGAVRRTPHTRKSAVEATSYGGASQQEHHQDEIPAASERGVKKR-----EAARAPAAKETTAKHKTSTGESRPEERRSKHASSASTRHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSGGGVQGMFDGAIGASPVLMITSMAMQLQSQETELENLQYQVTNLETVLE--EQASRDRYRDIVASRE-----RAELKDAAKDHDEHGHSKQWHSDGRDHSTQPHSDQISSERVSEMGRSLGELQRELEVIRDRAEDRDKRTELSLEDLEALIAAKDEDTNRRFQEQARENAEAIKKLLARLGTGADDENTTVVRKALIELKLELRSLYSSLDAISGNEISANQLRSMEGIRHLLASFSE----RARVLEEEIGDPAALAQDIVAGNVSARRFADMATDLGTTLFAFIKAQVLQARRAREGANGATKVHRRTSSAEVATAVVDANLSGENSAEASGXXXXXXXXXXXX-RSSATGASPQAWAKLSYLTYTRDRTSEKMPFPAGMVGLLKAVSDVLNHCVGTGDLA-----------------------------------------------------------IRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDAVKDKLAEMEETLAGFQRTMHLVLSEVDADRERSAAIAALGTTVKTMQSLFSRLSDDLESKAGASEIEKALEDMTLKISQTTDEQSKLQRLGRALGKDQNSSAAMKRLQIELEQ 1016
            MD IR+AQ+AEV+ALE +VG LASKQQSSI KL +Q++ ++AWK+++    RK AA+R+A      EN  + A  + N+                        A  +    E+ + G +  +E I  GAP   DV     R  ++E D+    E W  N+     E    IL+       +  D  E     L+   R       D  SS   S              ED+ R  + GE      ES H  +S   +A  G+                                    F +R+ +  S  +   PS L+            A   D   +E +Q P+  E+    P   +G   AG   R       A + +S G  S+    Q    A    G K R     E   A A  E T +       S+  ER+ +H SSA                   XXXXXXXXXXXX   +S GGVQGMFDGA+G +PVLM TSMAMQLQSQETELENLQ+Q+ +LE   +   QA R    D+  S       R     AA D DE+ H KQ HS G     Q  S +  SE  S+MGR LG+LQRE+  +RDR ED++KRTE+SLE+LEALIAAKDE+ NRRF +QA++NA+AI +LLARL + A DE + VV KAL+ELKLELRSL SSL+AIS NE      R    I   L   S     R   ++  IG+     ++   G      F+D ATDLGTTLFAF+KAQVLQARRA +G                                   XXXXXX        SS +GASPQAW KL+ LTYTR  TSEKMPFPAGMV LLKA+S+VLNHCVGTGDLA                                                           IRLSVTLEDLTVYVAQRADKERESVIRQLSAPVD+VK KL EME TLAGFQRTMHLVLSEVDADRERS AIA LGTTV+TMQ LFSRLS +L SKAGASEIEKALEDMTLKI+++ +EQ+KLQRLGR LGKDQNSS AMKRLQIELEQ
Sbjct:   25 MDDIRQAQLAEVDALERVVGALASKQQSSIAKLGKQVEMMMAWKSEVADMSRKAAAKRKA------ENFARRANTSANT------------------------ANLTGASGENLDAGVAREDETIAVGAPEQSDV----DRSALVEHDI----EEWHNNRSDEAHEQGSEILD------IDSSDEKESNKTELEREVRHRQAANDDDNSSLPCSA-------------EDAARGPSHGETYTTSTESPHRQNSDESSAGGGE------------------------------------FPSRQKRGSSSGSHWDPSNLTAV----------AGPEDEGFEEIEQDPR-LERNAGTPVAKAGGGTAGDDDRPKGASTIAGKVSSAGAHSEGRRGQRPQKARKRAGTKPRVSNIKEPTLADAPNEITRRD---VELSKKGERKDRHGSSAXX-----------------XXXXXXXXXXXXKKRESSGGVQGMFDGAMGGNPVLMFTSMAMQLQSQETELENLQHQLMSLEAGWDGQRQARRVGQEDVNKSHHNDPHSRDHQAKAALDSDEYAHPKQQHS-GPQPVAQSMSLERPSEESSQMGRDLGKLQREIIAVRDRVEDQEKRTEISLEELEALIAAKDEEYNRRFLKQAQQNADAINRLLARLDSNAVDEKSKVVHKALVELKLELRSLLSSLEAISSNERGRGCWRRRLEIPLRLPKISPWTALRQWWVKSYIGE-----KEGRKGGEEREHFSDRATDLGTTLFAFVKAQVLQARRAEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSEGVESSTSGASPQAWVKLNCLTYTRHGTSEKMPFPAGMVVLLKALSNVLNHCVGTGDLAVGTCVCFDLTEAPNHFTTPRLSLFKTWVRTTLTRNAPHKSPGCPPRKLKRHNDRIAKIKIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDSVKGKLGEMENTLAGFQRTMHLVLSEVDADRERSQAIADLGTTVETMQGLFSRLSKELSSKAGASEIEKALEDMTLKINKSANEQTKLQRLGRVLGKDQNSSVAMKRLQIELEQ 989          
BLAST of mRNA_L-elsbetiae_contig8019.17001.1 vs. uniprot
Match: A0A6H5JL36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL36_9PHAE)

HSP 1 Score: 464 bits (1194), Expect = 1.770e-148
Identity = 289/436 (66.28%), Postives = 334/436 (76.61%), Query Frame = 0
Query:  582 VSEMGRSLGELQRELEVIRDRAEDRDKRTELSLEDLEALIAAKDEDTNRRFQEQARENAEAIKKLLARLGTGADDENTTVVRKALIELKLELRSLYSSLDAISGNEISANQLRSMEGIRHLLASFSERARVLEEEIGDPAALAQDIVAGNVSARRFADMATDLGTTLFAFIKAQVLQARRAREGANGATKVHRRTSSAEVATAVVDANLSGENSAEASGXXXXXXXXXXXX-RSSATGASPQAWAKLSYLTYTRDRTSEKMPFPAGMVGLLKAVSDVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDAVKDKLAEMEETLAGFQRTMHLVLSEVDADRERSAAIAALGTTVKTMQSLFSRLSDDLESKAGASEIEKALEDMTLKISQTTDEQSKLQRLGRALGKDQNSSAAMKRLQIELEQ 1016
            +S+MGR LG LQRE+  +R+R ED++KRTE+SLE+LEALIAAKDE+  RRF++QA++NA+AI +LL RL + A DE + VV KAL+ELKLELRSL SSL+ IS NE+SAN+LRSM  IRHLL + SERARVLEEEIGD A LA+DIV  + +A    ++            + +VLQARRA                                      XXXXXXXXX     SS +GASPQAWAKL+YLTYTR  TSEKMPFPAGMV LLKA+S+VLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVD+VK+KL EME  LAGFQRTMHLVLSEVDADRERS AIA LGTTV+TMQ LFSRLS++L SKAGASEIEKALE+MT KI+++ +EQ+KLQRLGR LGKDQNSS AMKRLQIELEQ
Sbjct:    1 MSQMGRDLGNLQREIVAVRNRVEDQEKRTEISLEELEALIAAKDEEYKRRFRKQAQQNADAINRLLERLDSNAVDEKSKVVHKALVELKLELRSLLSSLEGISSNEVSANKLRSMGAIRHLLVNISERARVLEEEIGDLATLAKDIVMDSPAAMVGEELQWGKEGRKGGEER-EVLQARRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGVESSTSGASPQAWAKLNYLTYTRHGTSEKMPFPAGMVVLLKALSNVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDSVKEKLGEMENALAGFQRTMHLVLSEVDADRERSQAIAELGTTVETMQRLFSRLSEELSSKAGASEIEKALEEMTSKINKSANEQTKLQRLGRVLGKDQNSSVAMKRLQIELEQ 435          
BLAST of mRNA_L-elsbetiae_contig8019.17001.1 vs. uniprot
Match: A0A836C707_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C707_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.820e-10
Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 0
Query:  835 DRTSEKMPFPAGMVGLLKAVSDVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESVIRQLSAPVDAVKDKLAEMEETLAGFQRTMHLVLSEVDADRERSAAIAALGTTVKTMQSLFSRLSDDLESKAGASEIEKALEDMTLKI 980
            D  S +  F  G+  LL A+   L+ C  TG+LA+RLSV + DL  +       E E  +      +++    +A   +TL   QR++HL++SEV+ D  R  A+  L   V  ++  +  +  ++ +KAGA E++ +L+DM  K+
Sbjct:  520 DGLSMECTFAEGLAALLSALKACLDGCTSTGELAVRLSVAVSDLAAFARSTCSAEHEFTVEH-QGKLESQVLAMAGQHDTL---QRSLHLLISEVENDVARREAVKGLEGAVLDLRKAYEMVKAEMGNKAGADELQASLQDMAQKL 661          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8019.17001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNE5_ECTSI4.880e-15642.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL36_9PHAE1.770e-14866.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C707_9STRA7.820e-1030.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 589..620
NoneNo IPR availableCOILSCoilCoilcoord: 901..921
NoneNo IPR availableCOILSCoilCoilcoord: 496..530
NoneNo IPR availableCOILSCoilCoilcoord: 966..986
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 216..996

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8019contigL-elsbetiae_contig8019:1357..8537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8019.17001.1mRNA_L-elsbetiae_contig8019.17001.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8019 1330..8537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8019.17001.1 ID=prot_L-elsbetiae_contig8019.17001.1|Name=mRNA_L-elsbetiae_contig8019.17001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1016bp
MDAIRKAQVAEVEALEEIVGTLASKQQSSIKKLRQQMDTIIAWKTQIVLQ
DRKVAARREAAKATNRENVEKVAGDAVNSTVVTTTDVTTTDIGTIEGVDR
QSDAESSALVDEDKEDGESIIEEPIEQGAPLSDDVVFLMHRVTVLERDLV
KLQEMWDMNKGQRVIEVWMSILNRKRYKPSNIDDPVECAIVTLQNWWRDM
LVTKLDWRSSSGSSTSSREEESESKAKEEDSPRMSTQGEMDAESEHTASS
SPENATTGDAIKRPAQARKAIPPSDQSGQRSVEPSDRSSQSSEEDFGNRE
DQVLSVDAPLVPSTLSFSTEKTLKDLGEADFSDAEHQERQQHPQESEKAE
PVPSPASGRHAAGAVRRTPHTRKSAVEATSYGGASQQEHHQDEIPAASER
GVKKREAARAPAAKETTAKHKTSTGESRPEERRSKHASSASTRHQREHRH
HHRHKDRQDHKDHKDKNHKDHKDPKSGGGVQGMFDGAIGASPVLMITSMA
MQLQSQETELENLQYQVTNLETVLEEQASRDRYRDIVASRERAELKDAAK
DHDEHGHSKQWHSDGRDHSTQPHSDQISSERVSEMGRSLGELQRELEVIR
DRAEDRDKRTELSLEDLEALIAAKDEDTNRRFQEQARENAEAIKKLLARL
GTGADDENTTVVRKALIELKLELRSLYSSLDAISGNEISANQLRSMEGIR
HLLASFSERARVLEEEIGDPAALAQDIVAGNVSARRFADMATDLGTTLFA
FIKAQVLQARRAREGANGATKVHRRTSSAEVATAVVDANLSGENSAEASG
GGGGGGDAVGGGRSSATGASPQAWAKLSYLTYTRDRTSEKMPFPAGMVGL
LKAVSDVLNHCVGTGDLAIRLSVTLEDLTVYVAQRADKERESVIRQLSAP
VDAVKDKLAEMEETLAGFQRTMHLVLSEVDADRERSAAIAALGTTVKTMQ
SLFSRLSDDLESKAGASEIEKALEDMTLKISQTTDEQSKLQRLGRALGKD
QNSSAAMKRLQIELEQ
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