prot_L-elsbetiae_contig8012.16998.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8012.16998.1
Unique Nameprot_L-elsbetiae_contig8012.16998.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length859
Homology
BLAST of mRNA_L-elsbetiae_contig8012.16998.1 vs. uniprot
Match: A0A6H5KXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR2_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.090e-38
Identity = 313/780 (40.13%), Postives = 363/780 (46.54%), Query Frame = 0
Query:  118 ERRAAERAFGSMDQNSGRVSARRLGELLALLGRAPAGRDRGAMGSARAAGLLKAPSFSREDFVRWYLSWLNGQAG-------SNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------PSDADYASVLGEEELARLKRFNILTLDGGXXXXXXXXXXXAESERLAPGSPAAALRAAAAAFTSRSNIVANNENSD--PSHPRRSK--LWQAAEAGERKEEAAGMVNGGDDRQATYPAENSGRPL-EAGEGSTKAFGTAAAAVEATAKTVPPGSSPAAA-ATPQPRFQFGVQPPQQAAASGRGA-SSLHRAQGRGXXGRGSKTTRVGAGRTGGAS-------AGKGPPRGGSADKESPA-----SAPRSPADMMDVSESPLNSVFGSSNSPEFVFQAGQPRTSTPQQQPLSPPQPPPP-AYTAMPLPGASPAAGPGVRPVPXXXXXXXXXXXXXXXXXXXXXXXXXXSPSG----------GRLFSVGSSSS--SRPAAVPQAXXXXXXXXXXXXFSFGANTGDGAEGLPKRPTPARSAAXXXXXXXXXXXXXXXTFATGTIPNTAALGRRXXXXXXXSVSXXXXXXXXXXXXXXXXXRDRQGGNXXXXXXXXXXXGELNGGSNEGFGRAAAPEPTAATATAGPAALKSPLTAAGGFFASIFSPRRKASA---------------------AAIASKQQSGTDTCASCLGDASASSAGAATAAGWKAAPSQD-ATPQGTAPAHQPLRDDLIPPSMWSTPERG 827
            ER AAERAF SMDQNSGRVSARRL ELL LLG   A R   A  SARAAGLL APSFS ++FV WYLSWL  + G       SNG+                  XXXXXXXXXXXXXXXXXXXXXXXX          PSD     + G EE  RL R ++ + DG XXXXXXXXXXX                                      PS P+RSK         G +   A G   G  +  + +  EN  RP  E GEG++ + G  + A  + A   P  SS AAA ATP PRFQFGV   Q   A G GA SS HRA GRG  GRG K+ R G+ R   AS       AGK P  GG+            +AP SPA+MMDVSESPLN VFGSSNSP FVFQAGQPR S  Q             AYTAMP+               XXXXXXXXXXXXXXXXXXXXXXXXXX              GR F+VGSS +  SR  A+PQA            F+FG    +G     ++ TPA S+                TF+TGT+ N A  GRR       S S           XXXXX      G+           G    G+ + F       P A         LKSPL  A  FFAS+ SPR                          A  A   Q+ T          SA+ AG         A +Q+ +  Q +AP +QPLR+ ++PP +W+ P RG
Sbjct:   46 ERLAAERAFSSMDQNSGRVSARRLEELLTLLGMPAAQRGAKATESARAAGLLSAPSFSCQEFVDWYLSWLFKEEGPPREGASSNGTADGRPPIYRPFPGTNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAPPSDYGDGPLRGGEE--RLGRLSLASSDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCPQRSKPRXXXXXXVGRQSGGAVGSGGGDGEHCSDHVVENGSRPTQETGEGTSSSTGEVSGATSSEATRPPESSSAAAAPATPLPRFQFGVPSLQGTRAPGSGALSSAHRAHGRGAPGRGVKSARAGSARGSSASVLSAAAAAGKAPRVGGAGXXXXXXXXXXXAAPSSPAEMMDVSESPLNPVFGSSNSPGFVFQAGQPRASPSQXXXXXXXXXXXXXAYTAMPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRFFNVGSSVTPLSRSTAMPQARPATPPQSRPPAFTFGGKP-NGVPATGRQLTPAGSSLPGGGV----------TFSTGTVSN-AGPGRRGQRGRPTSASSLATPSRSSNTXXXXXGERDWHGSGGGGFGAVEQEGLKGVGAQDTFTGETDQRPAATP-------LKSPLATATSFFASMLSPRXXXXXXXXXXXXXXXXXXXXXXHDDYADAAFPDQTATT---------SAAPAGXXXXXXXAVASAQENSADQESAPGYQPLREHVVPPPLWTAPGRG 795          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8012.16998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXR2_9PHAE1.090e-3840.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8012contigL-elsbetiae_contig8012:3129..6104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8012.16998.1mRNA_L-elsbetiae_contig8012.16998.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8012 3129..6106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8012.16998.1 ID=prot_L-elsbetiae_contig8012.16998.1|Name=mRNA_L-elsbetiae_contig8012.16998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=859bp
MPFGLDDDDDDLDDLDDDDDDDIETTRVRLGRVDFGASPGKTGHAPPMSP
IPAPSNGRGAAGTHVPLFQDSGRRVAAAAASNGYKPGVPRTDTAEESAAG
AGGGAGAGAAAAETMPVERRAAERAFGSMDQNSGRVSARRLGELLALLGR
APAGRDRGAMGSARAAGLLKAPSFSREDFVRWYLSWLNGQAGSNGSGSSA
AAENGSGGGQPRPPPFQAAASDCSSSPSDAEPESESDSAPSDADYASVLG
EEELARLKRFNILTLDGGGGGGGGRGRDRAESERLAPGSPAAALRAAAAA
FTSRSNIVANNENSDPSHPRRSKLWQAAEAGERKEEAAGMVNGGDDRQAT
YPAENSGRPLEAGEGSTKAFGTAAAAVEATAKTVPPGSSPAAAATPQPRF
QFGVQPPQQAAASGRGASSLHRAQGRGAAGRGSKTTRVGAGRTGGASAGK
GPPRGGSADKESPASAPRSPADMMDVSESPLNSVFGSSNSPEFVFQAGQP
RTSTPQQQPLSPPQPPPPAYTAMPLPGASPAAGPGVRPVPPLPQAFVFGP
LSPVSAAASAGVNPIPSPSGGRLFSVGSSSSSRPAAVPQARPAAVPLSRP
AAFSFGANTGDGAEGLPKRPTPARSAATAGMAGGGGGGGGGVTFATGTIP
NTAALGRRGQRGRPGSVSSGASSGKSSNTTPPQPKRDRQGGNYGGGGGGG
GSNGELNGGSNEGFGRAAAPEPTAATATAGPAALKSPLTAAGGFFASIFS
PRRKASAAAIASKQQSGTDTCASCLGDASASSAGAATAAGWKAAPSQDAT
PQGTAPAHQPLRDDLIPPSMWSTPERGGLGGASSAAPPEQSPPSAASSLS
APPSPPSST
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