prot_L-elsbetiae_contig801.16997.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig801.16997.1
Unique Nameprot_L-elsbetiae_contig801.16997.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
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BLAST of mRNA_L-elsbetiae_contig801.16997.1 vs. uniprot
Match: D7FRM6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM6_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 3.840e-78
Identity = 173/241 (71.78%), Postives = 190/241 (78.84%), Query Frame = 0 
Query:    1 MPDPSSAKRTATDDAGTGIEEEVKDFSARLARLVVSRAFREASAXXXXXXXXXXXXXXXXEGPTRPGXXXXXXXXXXXXXXXXXLLCSRGG----------GGRTALGLYTAEAELILRGSQRLGAQLEEDAGTLRLRVFPALLENARQLRALYVAIDRAAEEVVPEVDAAVQRMEKAVYDLEELRKEQVDTRAPQGSFGLGVALGAGLWLPRAREDGVDVPEVFDTDELFRVKEGGLAPL 231
            M D ++ K    DD   GIEEEV+DF+AR ARLVVSR+FRE   XXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXX     G           G R+ALG Y AEAEL LRGSQRLGAQLE+DAG LR +VFPALLENAR+L ALYVAIDR  EEV+PEVDA V+RMEKAVYDLEE+RKEQVDTRAPQGSFGLG+ALGAGLW P+ +E GV VPEVFDTD+LFRV+EGGLAPL
Sbjct:    1 MSDQATDKNAVADDGEVGIEEEVRDFAARFARLVVSRSFREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGRNPGGSSSLRPGERSALGSYVAEAELSLRGSQRLGAQLEKDAGMLRSKVFPALLENARKLHALYVAIDRVTEEVMPEVDATVKRMEKAVYDLEEMRKEQVDTRAPQGSFGLGLALGAGLWFPQMKEKGVTVPEVFDTDKLFRVEEGGLAPL 241
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig801.16997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRM6_ECTSI3.840e-7871.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig801contigL-elsbetiae_contig801:31873..32568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig801.16997.1mRNA_L-elsbetiae_contig801.16997.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig801 31873..32852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig801.16997.1 ID=prot_L-elsbetiae_contig801.16997.1|Name=mRNA_L-elsbetiae_contig801.16997.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
MPDPSSAKRTATDDAGTGIEEEVKDFSARLARLVVSRAFREASASGAGEG
KGGGGGGGGGEGPTRPGGVGGTGGDDGGSSPAGLLLCSRGGGGRTALGLY
TAEAELILRGSQRLGAQLEEDAGTLRLRVFPALLENARQLRALYVAIDRA
AEEVVPEVDAAVQRMEKAVYDLEELRKEQVDTRAPQGSFGLGVALGAGLW
LPRAREDGVDVPEVFDTDELFRVKEGGLAPL*
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