prot_L-elsbetiae_contig801.16996.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig801.16996.1
Unique Nameprot_L-elsbetiae_contig801.16996.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length187
Homology
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BLAST of mRNA_L-elsbetiae_contig801.16996.1 vs. uniprot
Match: D7FRM7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM7_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 3.920e-67
Identity = 121/195 (62.05%), Postives = 146/195 (74.87%), Query Frame = 0 
Query:    2 IRRNSLRNEVDGSFEELEDVEDSSDTPPLSNKYLLKHQECVLLNRVLSDKTKLPPACFAPPSARAVRR----VSTRPKAPKPVPQD-ESAIGVLVRRITGAVQPVLSSLN-PSHAPKKEMGGVVTEEQCRTLADYLSPSVGGQYLLPTACSKLLNKGDGTDRAKM---NDAEVFDRLKRRPTVMAKEG-FPPTIC 186
            IRR++L NEVDG F++LE+ ED ++T P   +Y + HQECVLLNRVLSDK+ LP ACF PP A A  R     S RPK P+P+P+D E+A+  LVRRITGAVQPVLSSL  P HA KKEMGG +TEEQC+ LADYLSPSVGG YLLPTAC  LL   D  ++AKM    +AE++ RLK+R T MA+EG FPPT+C
Sbjct:   12 IRRDTLHNEVDGCFDDLEEFEDRNETSP---QYRVTHQECVLLNRVLSDKSTLPSACFVPPGAEAAARRASSSSQRPKEPRPLPEDGETAVVQLVRRITGAVQPVLSSLTTPLHARKKEMGGTITEEQCQALADYLSPSVGGGYLLPTACFGLLKPPD-EEQAKMYVMQNAEMYVRLKKRHTGMAEEGYFPPTMC 202
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig801.16996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRM7_ECTSI3.920e-6762.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig801contigL-elsbetiae_contig801:27434..29056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig801.16996.1mRNA_L-elsbetiae_contig801.16996.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig801 25961..29071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig801.16996.1 ID=prot_L-elsbetiae_contig801.16996.1|Name=mRNA_L-elsbetiae_contig801.16996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp
MIRRNSLRNEVDGSFEELEDVEDSSDTPPLSNKYLLKHQECVLLNRVLSD
KTKLPPACFAPPSARAVRRVSTRPKAPKPVPQDESAIGVLVRRITGAVQP
VLSSLNPSHAPKKEMGGVVTEEQCRTLADYLSPSVGGQYLLPTACSKLLN
KGDGTDRAKMNDAEVFDRLKRRPTVMAKEGFPPTIC*
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