prot_L-elsbetiae_contig800.16988.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig800.16988.1
Unique Nameprot_L-elsbetiae_contig800.16988.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length515
Homology
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: D8LQ32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ32_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 3.530e-144
Identity = 278/503 (55.27%), Postives = 322/503 (64.02%), Query Frame = 0
Query:    1 MVQAATALNARSRSDGDGRCGEHVAAVGLDGEDAGFWVFAFLSDVLKCLRKDKWSCGDS-TFVTGGNPKRKRDGEATGIKVVSYSPPXXXXXXXEAVGTVDVSDGDGRGSSGLVVDISALAHLVSAFPVGRGKRAMDLALKWLEVTQLLMEAAETRWHDVLADIFRSVPPSLWRLASRPGSLLPLKEPSRSPGCAFVEVDGADGALSQAMLTLVFRIVRCGDVPGSLLAPGVVCPGGFCENSEGNTDAGGEMRPEERPQATRPWSTAEEALAATAFAXXXXXXXXXXXVGFAGRLVRLFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSS--SPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSSVFESVCGVSAAVRAIEREKMEXXXXXXXXXXVLSEEEAGRLGKVVSCLSGLVASARGLENNGLVPYSLAPLLRRIDQVVSLYEDCGDADEVED 500
            MV+AATAL    R+   G          L G DAGFWV + +SD+LKCLRK  W  GD  +FV     KRKRD +  G +  S  P        E +                  D+  L+  V A PVG G  +MD+ALKW+EVTQLL+EAAETRW  VL ++ RSVPP+LWRLA+  GSLL  +EPSRSPG AFVEV GADGAL+QAML LVFRIVR GD  G      +V  G    N +   D   + R        +PW+TA EAL ATA A           +GFAGRLVRLF+DQDDALVDML+ NL IFHNT     E +T  +R  S    P LR LY   LHPG LFAALL EVRFDSGVLLDWL SPET FLQYLT+LLR AVAEWSDFA  VSC +  V E   GV A V+  + EK  XXXXXXXXX VLSEEEA RLG+ +SCL GLVASAR L+ NGLVPY++APLLRRIDQVVSLYE+CGDA++ E+
Sbjct:   92 MVEAATALMLGGRN---GATSSEDVEGSLGGADAGFWVLSLVSDILKCLRKRNWRFGDPISFV---RCKRKRDSDTGGPETASGLPSSTTAVVSEQL------------------DVPGLSEAVPAVPVGSGMDSMDIALKWVEVTQLLVEAAETRWRSVLVELLRSVPPTLWRLANN-GSLLLQEEPSRSPGSAFVEVRGADGALAQAMLGLVFRIVRLGDERGPFHVAALVDVGVVPNNEDRTEDL--DKRDRGGAPQNQPWTTAVEALVATATARDDDQESC---LGFAGRLVRLFADQDDALVDMLLLNLRIFHNTTK--AELDTGSDRPASDFPPPALRTLYRGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTLLLRFAVAEWSDFATRVSCAKGVVLED--GVDA-VQNTQHEKETXXXXXXXXXLVLSEEEANRLGRAMSCLGGLVASARALDRNGLVPYNIAPLLRRIDQVVSLYEECGDAEQEEE 559          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: A0A6H5KU10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU10_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 4.330e-134
Identity = 270/506 (53.36%), Postives = 310/506 (61.26%), Query Frame = 0
Query:    1 MVQAATALNARSRSDGDGRCGEHVAAVGLDGEDAGFWVFAFLSDVLKCLRKDKWSCGDSTFVTGGNPKRKRDGEATGIKVVSYSPPXXXXXXXEAVGTVDVSDGDGRGSSGLVVDISALAHLVSAFPVGRGKRAMDLALKWLEVTQLLMEAAETRWHDVLADIFRSVPPSLWRLASRPGSLLPLKEPSRSPGCAFVEVDGADGALSQAMLTLVFRIVRCGDVPGSLLAPGVVCPGGFCENSEGNT------DAGGEMRPEERPQATRPWSTAEEALAATAFAXXXXXXXXXXXVGFAGRLVRLFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSSVFESVCGVSAAVRAIEREKMEXXXXXXXXXXVLSEEEAGRLGKVVSCLSGLVASARGLENNGLVPYSLAPLLRRIDQVVSLYEDCGDADEVED 500
            MV+AATAL    R+   G          L G DAGFWV + +SD LK LRK  W  GD + +     KRKRDG+A G +  S  PP       E +                  D+  LA  V A PVG G  +MD+ LKW+E   LL+EAAETRW  V+  + RSVPP+LWRLA+  GSLL  +E SRSPG AFVEV GADGAL+QAML LVFRIV+  D  G      +V       N E  T      D GG       PQ  +PW+TA EAL ATA A           +GFAGRLVRLF+DQDDALVDML+ NL IFHNT     +  +    S    P LR LY   LHPG LFAALL EVRFDSGVLLDWL SPET FLQYLTMLLR AVAEWSDFA  VSC R    E   GV A V+  E EK     XXXXX  VLSEEEA RLG+ +SCLSGLVASAR L+ NGL+PY++APLLRRIDQVVSLYE+CGDA++ E+
Sbjct:  206 MVEAATALMLAGRN---GAASSEDVEGSLGGADAGFWVLSLVSDSLKYLRKCSWRFGDPSSIV--RCKRKRDGDAGGPETASDLPPSTTAVVSEQL------------------DVPGLAEEVPAVPVGSGMDSMDIVLKWVE---LLVEAAETRWRSVMVGLLRSVPPTLWRLANN-GSLLLQEESSRSPGSAFVEVRGADGALAQAMLGLVFRIVQLADERGPFDVAALV-DARVVPNDEDRTKELDKRDRGG------APQ-NQPWTTAVEALVATATASADDQESC---LGFAGRLVRLFADQDDALVDMLLLNLRIFHNTAKAELDAGSDRPGSDLPPPALRTLYHGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTMLLRFAVAEWSDFAARVSCARVVALED--GVDA-VQNTEDEKDMGEEXXXXXELVLSEEEANRLGRAMSCLSGLVASARALDRNGLMPYNIAPLLRRIDQVVSLYEECGDAEQGEE 670          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: A0A3M6TVD9_POCDA (LINES_N domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TVD9_POCDA)

HSP 1 Score: 71.6 bits (174), Expect = 1.990e-9
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  294 LVRLFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTR 405
            L+ LF DQDD LV++++  L +F          + +H+   S    ++ L    L+P  LFAA    V FD  +LLD LIS ET+FL+YLT  LR  V++W++F  S++  R
Sbjct:  528 LIALFVDQDDELVELMLALLLLF----------QELHKNFPSDEISMKILQQ--LNPHWLFAAFTESVGFDPSLLLDLLISSETRFLEYLTKYLRFVVSDWTEFTQSLATYR 627          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: UPI001CF196E7 (uncharacterized protein LOC114953806 n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF196E7)

HSP 1 Score: 71.2 bits (173), Expect = 2.630e-9
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 0
Query:  290 FAGRLVRLFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSS 407
            F   L+ LFSDQDD LVD L+  L ++         QE    R+   S  L N+ + ++ P +LF   +  + FD  VLLD LIS ET+FL+Y+ + L   V +W  F++SV   RS+
Sbjct:  519 FCSLLIALFSDQDDELVDALLFLLLLY---------QEIC--RAFPFSESLTNIQEKLI-PHSLFMEFMQSIDFDHSVLLDLLISSETRFLEYIVIYLHFVVNDWKSFSLSVGKPRSN 624          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: UPI00112E7C15 (protein Lines homolog 1-like n=2 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112E7C15)

HSP 1 Score: 63.5 bits (153), Expect = 6.460e-7
Identity = 35/110 (31.82%), Postives = 56/110 (50.91%), Query Frame = 0
Query:  288 VGFAGRLVRLFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDF 397
            +G A   + +F +QDD +++ +   L ++     +  E   +       +PG R  +D   +P  LF   L  + FD+ VLLD+LIS ET FL+Y    L+L   +WS F
Sbjct:  438 LGHACEWISIFIEQDDDMLEAMKTLLTLYLACERLCSESPAVQHHGEEDAPGSRLTHDGGYNPHCLFLFFLHNIVFDATVLLDFLISSETCFLEYFVRYLKLLTRDWSHF 547          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: A0A8M9Q898_DANRE (protein Lines homolog 1 isoform X1 n=5 Tax=Danio rerio TaxID=7955 RepID=A0A8M9Q898_DANRE)

HSP 1 Score: 60.8 bits (146), Expect = 4.040e-6
Identity = 65/223 (29.15%), Postives = 94/223 (42.15%), Query Frame = 0
Query:  297 LFSDQDDALVDML--IQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVS----------------VSCTRSSVFESV-CGVSAAVRAIER-------------EKMEXXXXXXXXXXVLSEEEAGRLGKVVSCLSGLVASARGLENNGLVPYSLAPLLRRIDQVVS 487
            LF++QDD +++    +  LY++              +RS S S     +     +P  LF  LL  + FD  VLLD+LIS ET FL+Y    L+L   +W+    S                +S   SS   +V CG SA    +E              E  E          +L EE    LGKV++CL  L  +   L N GL PY+ + LL+ ++ V S
Sbjct:  395 LFAEQDDDMMEATNTLMALYLYQ-------------KRSCSDS----GVCVWGFNPHCLFILLLRSLSFDHSVLLDFLISSETCFLEYFVRYLKLLCQDWTGLCRSSQHIEDGGGDAKRGSDLSIPASSAAAAVPCGESATGNQVETALVSRLVDYGSSDESEEADNVDCGASVMLVEESL--LGKVLACLMDLRTAVSRLHNRGLFPYNPSSLLKLLNGVES 598          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: UPI000154FF1B (protein Lines homolog 1 isoform X2 n=2 Tax=Rattus TaxID=10114 RepID=UPI000154FF1B)

HSP 1 Score: 60.1 bits (144), Expect = 6.260e-6
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0
Query:  294 LVRLFSDQDDALVDMLIQNLYIF-HNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSSVFESVCGVS 416
            L R+F +QDD +++    +L I+ H TR    E +T    +      + + +    +P  +F   L  + FDS VLLD+LIS ET FL+Y    L+L   +W  F  +  C   +  ES CGVS
Sbjct:  210 LSRVFIEQDDDMLEAAKASLSIYLHLTR----EWDTSTSLTPEKEAWIHSTHGHGYNPHCIFLFFLKNIAFDSTVLLDFLISSETCFLEYFVKYLKLLQKDWGHFLST--CQFFAAMESQCGVS 327          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: D3ZVQ9_RAT (Lines homolog 1 n=2 Tax=Rattus TaxID=10114 RepID=D3ZVQ9_RAT)

HSP 1 Score: 60.1 bits (144), Expect = 7.850e-6
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0
Query:  294 LVRLFSDQDDALVDMLIQNLYIF-HNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSSVFESVCGVS 416
            L R+F +QDD +++    +L I+ H TR    E +T    +      + + +    +P  +F   L  + FDS VLLD+LIS ET FL+Y    L+L   +W  F  +  C   +  ES CGVS
Sbjct:  444 LSRVFIEQDDDMLEAAKASLSIYLHLTR----EWDTSTSLTPEKEAWIHSTHGHGYNPHCIFLFFLKNIAFDSTVLLDFLISSETCFLEYFVKYLKLLQKDWGHFLST--CQFFAAMESQCGVS 561          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: A0A1A7X3F4_9TELE (Lines homolog n=2 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7X3F4_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 9.720e-6
Identity = 42/117 (35.90%), Postives = 57/117 (48.72%), Query Frame = 0
Query:  297 LFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSSVFESVC 413
            LF DQDD L++     L IF  TR   G      + S  S     + Y+   H    F  LL  + FD  +LLD+LIS ET FL+Y    L++   +W  F+ + SC  +S F S C
Sbjct:  403 LFGDQDDDLMEAANSFLSIFLITRRSLGL-----DGSAMSEVACVSGYNPHCH----FVLLLQSISFDHSILLDFLISSETCFLEYFVCYLKVLTGDWQGFSSACSCITASHFGSHC 510          
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Match: A0A3Q2E0C5_CYPVA (Lines homolog 1 n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2E0C5_CYPVA)

HSP 1 Score: 59.3 bits (142), Expect = 1.250e-5
Identity = 55/217 (25.35%), Postives = 90/217 (41.47%), Query Frame = 0
Query:  297 LFSDQDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHPGTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVSVSCTRSSVFESVCGVSAAVRAIERE-----------------------KMEXXXXXXXXXXVLSEEEAGRLGKVVSCLSGLVASARGLENNGLVPYSLAPLLRRIDQVVSLYE 490
            LF +QDD L++    +L IF + R   G ++     +T +S           +P   F  LL  + FD  +LLD+LIS ET FL+Y    L+    +W  F  + +C   S        S  +R +E +                       K++          +L ++    L + VSCLS L      L+   L PY+ + LL+ +  V +L++
Sbjct:  405 LFGEQDDDLMEAASASLSIFLSCRRSSGLEDHATMEATCASG---------CNPHCHFLLLLQSLSFDHSILLDFLISSETCFLEYFVRYLKYLRGDWRGF--TAACKALSDTHGSEARSRGLRLVEYDSSDESSEETPERDKLSGSTAAEVKLQCESVSSVAAVLLDQDVCRTLDRAVSCLSDLREVVTKLQVKKLFPYNPSSLLKLLAAVENLHQ 610          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig800.16988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LQ32_ECTSI3.530e-14455.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU10_9PHAE4.330e-13453.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M6TVD9_POCDA1.990e-938.39LINES_N domain-containing protein n=1 Tax=Pocillop... [more]
UPI001CF196E72.630e-938.14uncharacterized protein LOC114953806 n=2 Tax=Acrop... [more]
UPI00112E7C156.460e-731.82protein Lines homolog 1-like n=2 Tax=Rhinatrema bi... [more]
A0A8M9Q898_DANRE4.040e-629.15protein Lines homolog 1 isoform X1 n=5 Tax=Danio r... [more]
UPI000154FF1B6.260e-633.87protein Lines homolog 1 isoform X2 n=2 Tax=Rattus ... [more]
D3ZVQ9_RAT7.850e-633.87Lines homolog 1 n=2 Tax=Rattus TaxID=10114 RepID=D... [more]
A0A1A7X3F4_9TELE9.720e-635.90Lines homolog n=2 Tax=Iconisemion striatum TaxID=6... [more]
A0A3Q2E0C5_CYPVA1.250e-525.35Lines homolog 1 n=2 Tax=Cyprinodon TaxID=28741 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 415..444
IPR029415Protein Lines, C-terminalPFAMPF14695LINES_Ccoord: 451..486
e-value: 7.9E-8
score: 31.6
IPR032794Protein Lines, N-terminalPFAMPF14694LINES_Ncoord: 293..398
e-value: 9.5E-17
score: 61.5
IPR024875Protein LinesPANTHERPTHR16057WINS1, 2 PROTEINcoord: 290..490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig800contigL-elsbetiae_contig800:16279..21917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig800.16988.1mRNA_L-elsbetiae_contig800.16988.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig800 16117..22622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig800.16988.1 ID=prot_L-elsbetiae_contig800.16988.1|Name=mRNA_L-elsbetiae_contig800.16988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=515bp
MVQAATALNARSRSDGDGRCGEHVAAVGLDGEDAGFWVFAFLSDVLKCLR
KDKWSCGDSTFVTGGNPKRKRDGEATGIKVVSYSPPPPPPPAAEAVGTVD
VSDGDGRGSSGLVVDISALAHLVSAFPVGRGKRAMDLALKWLEVTQLLME
AAETRWHDVLADIFRSVPPSLWRLASRPGSLLPLKEPSRSPGCAFVEVDG
ADGALSQAMLTLVFRIVRCGDVPGSLLAPGVVCPGGFCENSEGNTDAGGE
MRPEERPQATRPWSTAEEALAATAFASADGDDGDGDGVGFAGRLVRLFSD
QDDALVDMLIQNLYIFHNTRPMGGEQETIHERSTSSSPGLRNLYDSILHP
GTLFAALLSEVRFDSGVLLDWLISPETKFLQYLTMLLRLAVAEWSDFAVS
VSCTRSSVFESVCGVSAAVRAIEREKMEEEEEEEEEELVLSEEEAGRLGK
VVSCLSGLVASARGLENNGLVPYSLAPLLRRIDQVVSLYEDCGDADEVED
DDLPVDGVFAKQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029415Lines_C
IPR032794LINES_N
IPR024875Protein_Lines