prot_L-elsbetiae_contig800.16987.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig800.16987.1
Unique Nameprot_L-elsbetiae_contig800.16987.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
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BLAST of mRNA_L-elsbetiae_contig800.16987.1 vs. uniprot
Match: A0A6H5KU10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU10_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.100e-23
Identity = 46/75 (61.33%), Postives = 55/75 (73.33%), Query Frame = 0 
Query:   15 LDTSPNGAIRVSRGNKISLVQRLAECDGPLACHAIQKCLHQYVCVCAAAISRGDVSLKGELEEWYLSVLDTIMDC 89
            L+   N  +   R +KIS VQRL  CDGPLACHAIQ+CL +Y+ VCA AISRGDVS KGELEEW  ++L+T M C
Sbjct:   45 LERDSNDVVSAPRNSKISFVQRLTLCDGPLACHAIQRCLQRYIYVCAEAISRGDVSRKGELEEWLAAILETTMFC 119
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig800.16987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KU10_9PHAE9.100e-2361.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig800contigL-elsbetiae_contig800:6770..15805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig800.16987.1mRNA_L-elsbetiae_contig800.16987.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig800 6767..15805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig800.16987.1 ID=prot_L-elsbetiae_contig800.16987.1|Name=mRNA_L-elsbetiae_contig800.16987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
MAGGITAVSSRPKELDTSPNGAIRVSRGNKISLVQRLAECDGPLACHAIQ
KCLHQYVCVCAAAISRGDVSLKGELEEWYLSVLDTIMDC
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